Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 EZH2P1-201ENST00000431167 291 ntBASIC3.47□□□□□ -1.85
SNX3O60493 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 MUPP-201ENST00000438111 566 ntBASIC3.47□□□□□ -1.85
SNX3O60493 Z95327.1-201ENST00000446082 482 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 RPS4XP10-201ENST00000465034 731 ntBASIC3.47□□□□□ -1.85
SNX3O60493 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX3O60493 FAM172BP-201ENST00000487497 1089 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 COX7A2P2-201ENST00000505291 250 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 AC107934.2-201ENST00000518653 310 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 AP003730.1-201ENST00000524605 285 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC239860.2-201ENST00000525886 270 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX3O60493 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 NIFKP6-201ENST00000598115 845 ntBASIC3.47□□□□□ -1.85
SNX3O60493 BBIP1P1-201ENST00000602999 279 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC128687.1-201ENST00000605304 619 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC055876.5-201ENST00000605667 259 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC024560.3-201ENST00000608482 349 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 MIR6730-201ENST00000622213 67 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AC053481.2-202ENST00000582394 1500 ntBASIC3.47□□□□□ -1.85
SNX3O60493 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX3O60493 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 AC139713.2-214ENST00000642059 1811 ntBASIC3.47□□□□□ -1.85
SNX3O60493 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
SNX3O60493 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.46□□□□□ -1.85
SNX3O60493 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SNX3O60493 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SNX3O60493 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SNX3O60493 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SNX3O60493 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
SNX3O60493 RPL7P26-201ENST00000333817 754 ntBASIC3.46□□□□□ -1.86
SNX3O60493 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 RNU6-289P-201ENST00000364093 107 ntBASIC3.46□□□□□ -1.86
SNX3O60493 RNU6-777P-201ENST00000364265 104 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AF228730.1-201ENST00000397972 663 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 EI24P1-201ENST00000416584 867 ntBASIC3.46□□□□□ -1.86
SNX3O60493 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX3O60493 MTND5P25-201ENST00000430499 799 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX3O60493 AL117351.1-201ENST00000438864 766 ntBASIC3.46□□□□□ -1.86
SNX3O60493 SDCBPP1-201ENST00000440192 890 ntBASIC3.46□□□□□ -1.86
SNX3O60493 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AL591503.2-201ENST00000442314 1005 ntBASIC3.46□□□□□ -1.86
SNX3O60493 MTND5P2-201ENST00000442927 1142 ntBASIC3.46□□□□□ -1.86
SNX3O60493 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC3.46□□□□□ -1.86
SNX3O60493 AC002381.1-201ENST00000447049 280 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.46□□□□□ -1.86
SNX3O60493 ATG12P2-201ENST00000456830 416 ntBASIC3.46□□□□□ -1.86
SNX3O60493 ARPC3P2-201ENST00000457786 533 ntBASIC3.46□□□□□ -1.86
SNX3O60493 MTCO2P6-201ENST00000463134 685 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC105137.1-201ENST00000484355 562 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AC093677.1-201ENST00000514414 678 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.46□□□□□ -1.86
SNX3O60493 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 COX6CP8-201ENST00000522620 226 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 OR6C7P-201ENST00000547875 934 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AL121603.1-201ENST00000553815 142 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.46□□□□□ -1.86
SNX3O60493 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.46□□□□□ -1.86
SNX3O60493 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.46□□□□□ -1.86
SNX3O60493 AC145350.1-201ENST00000567426 208 ntBASIC3.46□□□□□ -1.86
SNX3O60493 VN1R92P-201ENST00000598511 928 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC234771.5-201ENST00000600161 514 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC106791.2-201ENST00000604680 391 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AC010738.1-201ENST00000604970 987 ntBASIC3.46□□□□□ -1.86
SNX3O60493 AL357080.1-201ENST00000617394 239 ntBASIC3.46□□□□□ -1.86
SNX3O60493 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 AL049780.3-201ENST00000624612 1583 ntBASIC3.46□□□□□ -1.86
SNX3O60493 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SNX3O60493 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SNX3O60493 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SNX3O60493 XIAPP3-201ENST00000312918 795 ntBASIC3.45□□□□□ -1.86
SNX3O60493 RNU6-28P-201ENST00000362378 107 ntBASIC3.45□□□□□ -1.86
SNX3O60493 CYB5AP4-201ENST00000396692 399 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms