Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 RPL23AP33-201ENST00000442301 452 ntBASIC2.53□□□□□ -2
UBFD1O14562 RPS24P13-201ENST00000442520 397 ntBASIC2.53□□□□□ -2
UBFD1O14562 HMGN2P16-201ENST00000456802 261 ntBASIC2.53□□□□□ -2
UBFD1O14562 RPL31P50-201ENST00000471002 296 ntBASIC2.53□□□□□ -2
UBFD1O14562 KLHL2P1-201ENST00000508691 521 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.53□□□□□ -2
UBFD1O14562 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 AC139103.1-201ENST00000534696 1030 ntBASIC2.53□□□□□ -2
UBFD1O14562 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.53□□□□□ -2
UBFD1O14562 OR6C73P-201ENST00000546432 358 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.53□□□□□ -2
UBFD1O14562 MIR3690-201ENST00000580266 75 ntBASIC2.53□□□□□ -2
UBFD1O14562 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
UBFD1O14562 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
UBFD1O14562 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC104984.5-201ENST00000586878 94 ntBASIC2.53□□□□□ -2
UBFD1O14562 RPL23AP92-201ENST00000603609 255 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.53□□□□□ -2
UBFD1O14562 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.53□□□□□ -2
UBFD1O14562 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
UBFD1O14562 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
UBFD1O14562 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
UBFD1O14562 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC006378.2-201ENST00000623178 2476 ntBASIC2.53□□□□□ -2
UBFD1O14562 AC022031.1-201ENST00000585985 2593 ntBASIC2.53□□□□□ -2.01
UBFD1O14562 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.52□□□□□ -2.01
UBFD1O14562 CUL1P1-201ENST00000509510 2425 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
UBFD1O14562 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
UBFD1O14562 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.52□□□□□ -2.01
UBFD1O14562 RNU1-100P-201ENST00000365255 165 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
UBFD1O14562 RNU6-40P-201ENST00000384254 107 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 MIR142-201ENST00000384835 87 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AL096701.2-201ENST00000416920 238 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.52□□□□□ -2.01
UBFD1O14562 UBE2V2P3-201ENST00000433562 437 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 RPL7P29-201ENST00000437151 728 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 SSXP4-201ENST00000451349 245 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 BX276092.4-201ENST00000452056 248 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AC104689.1-201ENST00000473356 768 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 SRIP1-201ENST00000489235 288 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
UBFD1O14562 RPL23AP55-201ENST00000498163 452 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.52□□□□□ -2.01
UBFD1O14562 AC005351.1-201ENST00000511152 786 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AC017037.2-201ENST00000513850 890 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 SNORA31.13-201ENST00000516624 135 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 CKS1BP7-201ENST00000522230 235 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AP003102.1-201ENST00000525638 661 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AC004923.2-201ENST00000529649 369 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.52□□□□□ -2.01
UBFD1O14562 CENPUP2-201ENST00000555897 1186 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.52□□□□□ -2.01
UBFD1O14562 RPL23AP88-201ENST00000605759 454 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 AC022079.2-201ENST00000619739 566 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.52□□□□□ -2.01
UBFD1O14562 MTCO1P8-201ENST00000416914 1523 ntBASIC2.52□□□□□ -2.01
UBFD1O14562 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
UBFD1O14562 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
UBFD1O14562 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 SNORA27.3-201ENST00000364937 134 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBFD1O14562 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 NUP35P2-201ENST00000416748 943 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.51□□□□□ -2.01
UBFD1O14562 LINC01347-201ENST00000417964 355 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 RPL21P112-201ENST00000434403 463 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC105272.1-201ENST00000438604 198 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC008280.2-201ENST00000455473 307 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 NECAP1P2-201ENST00000455668 727 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC126182.1-201ENST00000478134 357 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC104687.1-201ENST00000485829 412 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 RNU6-551P-201ENST00000516661 103 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 RN7SKP283-201ENST00000517197 270 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 OR5AK3P-201ENST00000527486 1297 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.51□□□□□ -2.01
UBFD1O14562 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBFD1O14562 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.51□□□□□ -2.01
UBFD1O14562 MIR3162-201ENST00000581818 82 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.51□□□□□ -2.01
UBFD1O14562 AL035413.2-201ENST00000604801 525 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
UBFD1O14562 CR589904.2-201ENST00000612533 440 ntBASIC2.51□□□□□ -2.01
UBFD1O14562 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBFD1O14562 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 208.1 ms