Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC007742.1-201ENST00000425789 329 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 RPL23AP25-201ENST00000430973 463 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 ELOCP26-201ENST00000436067 329 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 UBE2V1P8-201ENST00000437166 265 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 USP9YP29-201ENST00000445112 563 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC002381.1-201ENST00000447049 280 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC114755.5-201ENST00000447760 831 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 MTND3P10-201ENST00000450967 341 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AP001992.1-205ENST00000462248 379 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC022447.3-201ENST00000506865 495 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 POU5F1P7-201ENST00000508759 541 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC098799.2-201ENST00000509466 868 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC006499.6-201ENST00000511169 607 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC093677.1-201ENST00000514414 678 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 MTND5P4-201ENST00000514978 288 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 RNU6-27P-201ENST00000516146 107 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 RNU6-718P-201ENST00000516166 105 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 TPRKBP2-201ENST00000565969 475 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC078795.3-201ENST00000602913 472 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC099654.12-201ENST00000639868 649 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM38O00635 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM38O00635 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM38O00635 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
TRIM38O00635 AL031985.3-201ENST00000565390 2449 ntBASIC4.4□□□□□ -1.71
TRIM38O00635 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.39□□□□□ -1.71
TRIM38O00635 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
TRIM38O00635 AL161781.1-201ENST00000354277 403 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNU6-660P-201ENST00000364566 109 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNA5SP366-201ENST00000365454 123 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM38O00635 SNORA75-201ENST00000384158 137 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNU6-1011P-201ENST00000384668 107 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNU6-114P-201ENST00000384704 105 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 MIR1305-201ENST00000408300 86 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 MIR320C1-201ENST00000408566 88 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RNA5SP104-201ENST00000410989 118 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 AC010975.2-201ENST00000427781 588 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 Z95327.1-201ENST00000446082 482 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 RPL23AP43-201ENST00000446445 471 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC003071.1-201ENST00000451219 789 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 HMGB1P15-201ENST00000453854 435 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 UQCRHP4-201ENST00000471686 272 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC109486.1-201ENST00000486833 374 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 FCF1P3-201ENST00000496394 590 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC021678.1-201ENST00000505195 936 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 AP003730.1-201ENST00000524605 285 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AP005639.2-201ENST00000527592 928 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AP001646.1-201ENST00000527936 915 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM38O00635 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM38O00635 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM38O00635 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM38O00635 PCMTD1P2-201ENST00000565017 355 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC106785.1-201ENST00000565935 262 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 ROCK1P1-201ENST00000573767 549 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC090615.1-201ENST00000577519 154 ntBASIC4.39□□□□□ -1.71
TRIM38O00635 AC008638.3-201ENST00000603341 463 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms