Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 Z95114.1-201ENST00000624264 14574 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 OR52B3P-201ENST00000314715 928 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 MIR133A2-201ENST00000347538 102 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RNU6-806P-201ENST00000365147 105 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RNU6-746P-201ENST00000384112 109 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.518-201ENST00000384552 113 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 MIR628-201ENST00000385229 95 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AL590704.1-201ENST00000402856 794 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RNU6-174P-201ENST00000410406 106 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 HMGN1P20-201ENST00000411849 300 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RAC1P3-201ENST00000416129 580 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RPS15AP6-201ENST00000420703 385 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RPL23AP33-201ENST00000442301 452 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC090602.1-201ENST00000469695 252 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RN7SKP238-201ENST00000516483 249 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC104576.1-201ENST00000524225 88 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 NPIPB1P-202ENST00000588786 828 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC008555.7-201ENST00000605008 583 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 RNU6-85P-201ENST00000605989 107 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 SAGE4P-201ENST00000442271 3381 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AOX3P-204ENST00000491025 2107 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC022325.1-201ENST00000502748 2199 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 AC027287.1-201ENST00000553115 1453 ntBASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HRH3Q9Y5N1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC009229.4-201ENST00000623854 1947 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 SNORA21-201ENST00000362423 132 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 Y_RNA.26-201ENST00000362539 101 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 RNU6-933P-201ENST00000384424 107 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 SAR1AP2-201ENST00000392696 594 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC110754.1-201ENST00000399740 601 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 MTCO2P33-201ENST00000402100 465 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC096921.1-201ENST00000411661 375 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 EI24P4-201ENST00000423683 1078 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC004383.1-201ENST00000438135 289 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 GAPDHP27-201ENST00000447427 1020 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AP000942.1-201ENST00000463969 747 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC098847.1-201ENST00000473094 348 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC105384.2-201ENST00000508433 640 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC010343.2-201ENST00000510162 224 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 MTCO3P44-201ENST00000510977 541 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 RN7SKP60-201ENST00000516985 239 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 OR4H6P-201ENST00000563771 921 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC009779.6-201ENST00000603972 165 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AL034351.1-201ENST00000605288 668 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 AC064801.1-201ENST00000612025 407 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 FAM27E2-201ENST00000619668 403 ntBASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HRH3Q9Y5N1 RNA5SP273-201ENST00000362484 113 ntBASIC5.61□□□□□ -1.51
HRH3Q9Y5N1 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms