Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 AL160413.1-201ENST00000622780 310 ntBASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 AC090617.10-201ENST00000624308 134 ntBASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
BRPF3Q9ULD4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 RNU5A-8P-201ENST00000364102 114 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 RNU2-15P-201ENST00000410692 191 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC009161.1-201ENST00000417306 376 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC069213.2-201ENST00000420238 366 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL355433.1-201ENST00000422804 300 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 SRIP2-201ENST00000428470 166 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC008065.1-201ENST00000428525 348 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL389915.2-201ENST00000454576 441 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 CYCSP34-201ENST00000458172 304 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC090686.1-201ENST00000481577 749 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC020893.1-201ENST00000502452 580 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC026427.2-201ENST00000506228 536 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC103851.1-201ENST00000506833 274 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 HIGD1AP14-201ENST00000507617 282 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC107953.1-201ENST00000522216 297 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC022882.1-201ENST00000532142 501 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC068831.4-201ENST00000556118 109 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL355375.2-201ENST00000574825 175 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC007687.1-201ENST00000602704 304 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL512782.1-201ENST00000603093 364 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC004853.1-201ENST00000604902 698 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 PART1_1.1-201ENST00000611761 217 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 uc_338.5-201ENST00000611839 155 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 RMST_7.1-201ENST00000621935 268 ntBASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
BRPF3Q9ULD4 AL445487.1-201ENST00000415694 1580 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 ZNF33CP-201ENST00000432492 2030 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 SNORA17.1-201ENST00000362945 126 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RNU5E-8P-201ENST00000363502 116 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RNA5SP28-201ENST00000363841 119 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RNU6-1227P-201ENST00000383981 107 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 SNORA32.2-201ENST00000384049 122 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RN7SKP126-201ENST00000411143 300 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AL354751.2-201ENST00000415471 210 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC127526.1-201ENST00000417526 366 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AL049714.1-201ENST00000466686 347 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RPL7P19-201ENST00000469948 618 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 HMGN1P10-201ENST00000474557 553 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RN7SL30P-201ENST00000488416 306 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 FTH1P21-201ENST00000512179 511 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RNA5SP497-201ENST00000516081 97 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 RNA5SP249-201ENST00000516127 99 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 BTF3P12-201ENST00000519620 469 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC087241.2-201ENST00000535801 324 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC245517.5-201ENST00000611529 162 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 AC093913.1-201ENST00000614178 329 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 TPTEP1-208ENST00000636884 213 ntBASIC6.01□□□□□ -1.45
BRPF3Q9ULD4 MIR1302-1-201ENST00000637932 143 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms