Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 VN1R9P-201ENST00000614184 867 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 MIR8070-201ENST00000616510 88 ntBASIC2.87□□□□□ -1.95
SCN11AQ9UI33 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SCN11AQ9UI33 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC245100.2-201ENST00000454544 1679 ntBASIC2.86□□□□□ -1.95
SCN11AQ9UI33 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC116337.1-201ENST00000509680 687 ntBASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC074029.1-201ENST00000552531 1044 ntBASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AC023813.4-201ENST00000607580 580 ntBASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AP001521.1-201ENST00000609150 300 ntBASIC2.86□□□□□ -1.95
SCN11AQ9UI33 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SCN11AQ9UI33 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC106901.1-201ENST00000425086 698 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC010881.1-201ENST00000433830 235 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AL353597.2-202ENST00000434901 373 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC026412.2-201ENST00000512270 1075 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 SCARNA16.3-201ENST00000516595 184 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 OR4R2P-201ENST00000530815 597 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC023043.3-201ENST00000593113 385 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AC104237.2-201ENST00000612456 443 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 AP001148.1-201ENST00000624124 2359 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 RLIMP2-201ENST00000427891 1563 ntBASIC2.85□□□□□ -1.95
SCN11AQ9UI33 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SCN11AQ9UI33 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 MIR221-201ENST00000385135 110 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 RNU2-2P-201ENST00000410396 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AL121882.1-201ENST00000422893 417 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC098826.1-201ENST00000433943 471 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC124916.1-201ENST00000444020 547 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 SCARNA17.1-201ENST00000516211 143 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 SCARNA17.2-201ENST00000516334 143 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 IGHV3-76-201ENST00000522465 295 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC135628.1-201ENST00000568867 534 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC005951.1-201ENST00000576706 485 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 MIR4498-201ENST00000577599 66 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.15-201ENST00000611544 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.16-201ENST00000613119 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.12-201ENST00000613778 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.20-201ENST00000613956 192 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 SCARNA17.4-201ENST00000614296 143 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.9-201ENST00000615427 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.11-201ENST00000616345 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.2-201ENST00000616535 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.3-201ENST00000617785 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.19-201ENST00000618602 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 RNU2-1-201ENST00000618664 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.6-201ENST00000619225 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 VN1R7P-201ENST00000619242 903 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.5-201ENST00000619465 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 U2.10-201ENST00000620268 191 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 C2orf27A-204ENST00000623058 969 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC048347.1-201ENST00000624621 427 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 CYP3A51P-201ENST00000633513 256 ntBASIC2.84□□□□□ -1.95
SCN11AQ9UI33 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SCN11AQ9UI33 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 MIR6073-201ENST00000352083 89 ntBASIC2.84□□□□□ -1.96
SCN11AQ9UI33 DEFA7P-201ENST00000382676 285 ntBASIC2.84□□□□□ -1.96
SCN11AQ9UI33 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 RPL7P52-201ENST00000449200 742 ntBASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AC091179.1-201ENST00000461606 579 ntBASIC2.84□□□□□ -1.96
SCN11AQ9UI33 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.84□□□□□ -1.96
SCN11AQ9UI33 AC084035.1-201ENST00000634543 607 ntBASIC2.84□□□□□ -1.96
SCN11AQ9UI33 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SCN11AQ9UI33 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms