Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MIR512-1-201ENST00000384913 84 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MIR16-1-201ENST00000385271 89 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 SNORD65C-201ENST00000390962 71 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 CYB5AP4-201ENST00000396692 399 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 YY1P1-201ENST00000427625 668 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MTND4LP10-201ENST00000435146 291 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RPL23AP16-201ENST00000441715 421 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 OR6K5P-201ENST00000447050 945 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RBMY2UP-201ENST00000453474 324 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RPS29P12-201ENST00000460178 152 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC025181.1-201ENST00000477507 416 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 RPL32P9-201ENST00000487963 407 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 PRELID3BP6-201ENST00000503839 571 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC093767.1-201ENST00000504523 156 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 ZNF705CP-201ENST00000530515 889 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AP000916.1-201ENST00000533869 835 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AP005205.1-201ENST00000563503 508 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MIR4284-201ENST00000578924 81 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MIR5685-201ENST00000579080 79 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 MIR3605-201ENST00000583214 100 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 GLUD1P4-201ENST00000590914 418 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 TPMTP1-201ENST00000592307 737 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC133794.1-201ENST00000602731 914 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 GAS5-AS1-201ENST00000602767 694 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 KATNBL1P5-201ENST00000605015 517 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 AC091925.2-201ENST00000625059 256 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VCX3AQ9NNX9 SGO1P1-201ENST00000603525 1447 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MIR372-201ENST00000362225 67 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AL121978.1-201ENST00000402778 359 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MTND2P3-201ENST00000452458 470 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MTCO3P2-201ENST00000457365 171 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 RPL21P47-201ENST00000483696 477 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 DSTNP2-201ENST00000504533 515 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 RPL37P25-201ENST00000507308 276 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 RNA5SP367-201ENST00000516557 118 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC034205.1-201ENST00000520621 638 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MIR3922-201ENST00000585192 84 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 CCDC58P3-201ENST00000590792 430 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC245036.5-201ENST00000596330 847 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC015871.2-201ENST00000603605 948 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 PRELID3BP8-201ENST00000604148 295 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC011890.2-201ENST00000613393 294 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 VN1R9P-201ENST00000614184 867 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 AL513185.3-201ENST00000433335 1300 ntBASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.68□□□□□ -1.98
VCX3AQ9NNX9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 RNU5D-1-201ENST00000363299 116 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 RNU1-13P-201ENST00000384499 162 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 SNORA1.3-201ENST00000384676 136 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 FO393413.1-201ENST00000402892 195 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 RNU4-27P-201ENST00000410889 139 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 HMGN1P24-201ENST00000412282 298 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 AC008173.1-201ENST00000418901 264 ntBASIC2.67□□□□□ -1.98
VCX3AQ9NNX9 BX842559.1-201ENST00000419615 532 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms