Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 AC092747.4-201ENST00000620519 1861 ntBASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
YIPF4Q9BSR8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 OR4G1P-203ENST00000641984 1631 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 NACAP2-201ENST00000318548 624 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RNU6-39P-201ENST00000384344 107 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RPL21P67-201ENST00000402896 478 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 MTND2P23-201ENST00000422990 651 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 UBE2V1P13-201ENST00000436983 439 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 CEACAMP7-201ENST00000444105 496 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 MTND1P9-201ENST00000453775 944 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RNU7-63P-201ENST00000459054 62 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 HMGN2P26-201ENST00000463169 339 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RN7SL329P-201ENST00000467740 299 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RPS18P6-201ENST00000476880 458 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RPSAP50-201ENST00000481955 852 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RPL23AP72-201ENST00000492447 435 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 HSPD1P15-201ENST00000505573 1122 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AP003497.1-201ENST00000528472 562 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 GSTP1P1-201ENST00000548078 319 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC098848.2-201ENST00000588023 330 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC008814.1-201ENST00000603797 406 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AL162730.1-201ENST00000605734 292 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 uc_338.5-201ENST00000611839 155 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AC015871.5-202ENST00000623252 701 ntBASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
YIPF4Q9BSR8 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 SCARNA15-201ENST00000607520 4325 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AC244517.1-201ENST00000606030 2086 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RNU6-263P-201ENST00000363811 107 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 Y_RNA.255-201ENST00000364581 97 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RNA5SP90-201ENST00000364801 99 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RNA5SP455-201ENST00000365190 119 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 U3.15-201ENST00000365398 212 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RNU4-20P-201ENST00000365601 151 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 SNORA32.2-201ENST00000384049 122 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 U3.20-201ENST00000390909 217 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AL645927.1-201ENST00000396783 406 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AL645937.1-202ENST00000421799 937 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AL391219.1-201ENST00000422570 483 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 FTH1P1-201ENST00000437933 532 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 RPS29P10-201ENST00000439197 166 ntBASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.86□□□□□ -1.63
YIPF4Q9BSR8 AC073415.1-201ENST00000449240 153 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms