Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 MIR6130-201ENST00000619419 109 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC233309.1-201ENST00000619522 751 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC008443.7-201ENST00000622195 246 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 MIR3653-201ENST00000625572 110 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC127502.3-201ENST00000636170 1206 ntBASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HERPUD2Q9BSE4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-500P-201ENST00000362349 107 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 Y_RNA.560-201ENST00000384689 102 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RPS3AP24-201ENST00000407896 734 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RPL7AP73-201ENST00000413490 353 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 FAM103A2P-201ENST00000444122 354 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC098824.1-201ENST00000453565 980 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC007967.1-201ENST00000455422 1159 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RNA5SP246-201ENST00000458909 119 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC025445.1-201ENST00000502728 300 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RNU1-61P-201ENST00000516107 151 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL391156.1-201ENST00000554965 554 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC060771.1-201ENST00000582031 164 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 BDH2P1-201ENST00000602288 736 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL450472.3-201ENST00000615578 367 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC009268.2-201ENST00000621925 457 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AL356266.1-201ENST00000623311 483 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC019226.2-201ENST00000625973 424 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC006927.3-201ENST00000638789 384 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 OR8B1P-202ENST00000641132 1178 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC005832.2-201ENST00000538921 1430 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 CR383658.2-201ENST00000547576 1525 ntBASIC4.26□□□□□ -1.73
HERPUD2Q9BSE4 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC066616.2-201ENST00000559334 1481 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC116667.1-201ENST00000604855 2072 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 OR11H4-201ENST00000315409 1082 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 RNU6-637P-201ENST00000384050 107 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL359704.1-201ENST00000411586 781 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 VPS26BP1-201ENST00000417155 755 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC092017.2-201ENST00000427600 362 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL365396.1-201ENST00000430854 671 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AL592447.1-201ENST00000447592 540 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 RPS11P1-201ENST00000451072 473 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AP1S2P1-201ENST00000457344 379 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 OR9M1P-201ENST00000459641 921 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC108860.1-201ENST00000484521 383 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 RN7SKP13-201ENST00000515933 244 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AP001804.3-201ENST00000525146 880 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 PCMTD1P2-201ENST00000565017 355 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 AC011468.4-201ENST00000603942 409 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 PRELID3BP8-201ENST00000604148 295 ntBASIC4.25□□□□□ -1.73
HERPUD2Q9BSE4 ARF4P1-201ENST00000605447 541 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms