Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS20P32-201ENST00000456044 356 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC087385.1-201ENST00000475062 312 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 RBM43P1-201ENST00000476891 1081 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC019235.1-201ENST00000503847 207 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 HMGB1P29-201ENST00000505659 499 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 TXNP6-201ENST00000510190 310 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC074344.1-201ENST00000512823 224 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 RNA5SP446-201ENST00000515955 82 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 Y_RNA.672-201ENST00000516289 104 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AP001893.2-201ENST00000526949 202 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 OR5AQ1P-201ENST00000527596 927 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AK6P1-201ENST00000540219 478 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL121579.1-201ENST00000555129 305 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC034268.2-201ENST00000571784 482 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC091042.1-201ENST00000579213 173 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC091178.1-203ENST00000584586 279 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 NRBF2P1-201ENST00000587407 859 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 DUXAP4-201ENST00000603046 613 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL512782.1-201ENST00000603093 364 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC104458.1-201ENST00000608243 463 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL590282.1-201ENST00000610379 1136 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 AL732618.1-201ENST00000623251 301 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 LRRC77P-213ENST00000637727 880 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 AC099654.14-201ENST00000638599 341 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX18Q96RF0 MAPK10-304ENST00000641341 3984 ntBASIC4.16□□□□□ -1.74
SNX18Q96RF0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX18Q96RF0 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX18Q96RF0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.74
SNX18Q96RF0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX18Q96RF0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX18Q96RF0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX18Q96RF0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SNX18Q96RF0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
SNX18Q96RF0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX18Q96RF0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNU6-1090P-201ENST00000364065 94 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNVU1-3-201ENST00000364313 161 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 Y_RNA.409-201ENST00000383990 98 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNU6-398P-201ENST00000384143 109 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 MIR141-201ENST00000384975 95 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNU1-82P-201ENST00000390851 165 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 Z98745.1-201ENST00000402553 494 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AL356421.1-201ENST00000403255 413 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AL049697.2-201ENST00000403708 294 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RPS3AP24-201ENST00000407896 734 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RNA5SP113-201ENST00000410486 84 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RPL31P2-201ENST00000413849 377 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC004987.3-201ENST00000413879 771 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AL109913.1-201ENST00000421173 514 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 NRBF2P3-201ENST00000432731 865 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 HLA-N-201ENST00000437516 135 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC127537.2-201ENST00000439258 465 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC073264.2-201ENST00000448886 166 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 BX276092.4-201ENST00000452056 248 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 C1DP4-201ENST00000455429 424 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RN7SL459P-201ENST00000481078 302 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RPL23AP72-201ENST00000492447 435 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 SAP18P1-201ENST00000512058 390 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 RN7SKP277-201ENST00000516895 283 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 RAB9BP1-201ENST00000519581 626 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC022616.6-201ENST00000520479 119 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX18Q96RF0 OR5AN2P-201ENST00000534535 896 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX18Q96RF0 CYP4A43P-201ENST00000568156 121 ntBASIC4.15□□□□□ -1.75
SNX18Q96RF0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms