Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 IGLV3-26-201ENST00000520756 302 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL352979.3-201ENST00000553515 247 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC007424.1-203ENST00000554613 687 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 BNIP3P5-201ENST00000562290 498 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC074050.1-201ENST00000563247 211 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 MTCYBP33-201ENST00000575007 1130 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC234771.5-201ENST00000600161 514 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC068790.3-201ENST00000602988 553 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC112191.3-201ENST00000604371 277 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL022099.1-201ENST00000604551 712 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC087752.4-201ENST00000605911 462 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL731566.2-201ENST00000618971 317 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL713922.2-201ENST00000619384 716 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AL360181.4-201ENST00000621752 134 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC009878.1-201ENST00000621819 340 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC007546.2-201ENST00000623996 360 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 AC010300.1-201ENST00000600671 5134 ntBASIC4.33□□□□□ -1.72
CCDC138Q96M89 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC138Q96M89 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RNU6-600P-201ENST00000362524 99 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RNU6-637P-201ENST00000384050 107 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 MIR3065-201ENST00000390137 79 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RNU6-882P-201ENST00000391025 103 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC078974.1-201ENST00000411597 223 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 HMGN1P24-201ENST00000412282 298 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 SSXP9-201ENST00000417503 292 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 RPL21P32-201ENST00000419877 477 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 MTCO1P39-201ENST00000426148 480 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC110792.1-201ENST00000491826 472 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 RPL23AP55-201ENST00000498163 452 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 NPM1P41-201ENST00000512920 831 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC022483.1-201ENST00000514020 567 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RNU2-58P-201ENST00000516403 183 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RPL12P22-201ENST00000519073 490 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 HMGN1P28-201ENST00000521340 364 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AP000907.2-201ENST00000530827 353 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC068831.4-201ENST00000556118 109 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 ZNF519P3-201ENST00000557158 1032 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 FAM60BP-201ENST00000578364 658 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 RPL12P25-202ENST00000598100 674 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC138749.5-201ENST00000611461 208 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC116165.2-201ENST00000616705 206 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC108479.2-201ENST00000617314 601 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 MIR6891-201ENST00000618788 93 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC012150.2-201ENST00000621300 544 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC138Q96M89 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
CCDC138Q96M89 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC138Q96M89 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC138Q96M89 RAD17P1-201ENST00000418130 2042 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC138Q96M89 CCNG1P1-201ENST00000406783 885 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 RNU6-516P-201ENST00000411381 104 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 BTF3L4P1-201ENST00000413813 468 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 SNRPFP1-201ENST00000414761 252 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC016907.1-201ENST00000419483 435 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 CYP4F29P-201ENST00000420685 446 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AC079780.1-201ENST00000428259 207 ntBASIC4.31□□□□□ -1.72
CCDC138Q96M89 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
CCDC138Q96M89 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms