Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.57□□□□□ -1.84
USP47Q96K76 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
USP47Q96K76 RPS7P5-201ENST00000441482 581 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.57□□□□□ -1.84
USP47Q96K76 AC092685.1-201ENST00000447960 1243 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.57□□□□□ -1.84
USP47Q96K76 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.57□□□□□ -1.84
USP47Q96K76 AC126182.1-201ENST00000478134 357 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 RN7SKP234-201ENST00000517173 224 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 AC109329.2-201ENST00000519658 482 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 AC008562.1-201ENST00000521763 330 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.57□□□□□ -1.84
USP47Q96K76 CKS1BP1-201ENST00000555221 240 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.57□□□□□ -1.84
USP47Q96K76 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.57□□□□□ -1.84
USP47Q96K76 AC079089.3-201ENST00000603094 673 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 AC011374.2-201ENST00000607135 526 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 MIR6864-201ENST00000617935 70 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 CRYM-AS1-204ENST00000637983 556 ntBASIC3.57□□□□□ -1.84
USP47Q96K76 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP47Q96K76 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP47Q96K76 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
USP47Q96K76 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 AC025125.1-201ENST00000624743 1922 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 OR5T3-201ENST00000303059 1023 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 RNU6-883P-201ENST00000384597 107 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 MUPP-201ENST00000438111 566 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.56□□□□□ -1.84
USP47Q96K76 GSTA11P-201ENST00000452866 669 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 AC008280.2-201ENST00000455473 307 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC008494.2-201ENST00000514544 370 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC027176.1-201ENST00000560204 514 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.56□□□□□ -1.84
USP47Q96K76 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
USP47Q96K76 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.56□□□□□ -1.84
USP47Q96K76 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP47Q96K76 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.56□□□□□ -1.84
USP47Q96K76 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
USP47Q96K76 AC023128.2-201ENST00000420880 1223 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 ARL2BPP3-201ENST00000421226 480 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 ZYG11AP1-201ENST00000430329 837 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 snoU13.26-201ENST00000459452 105 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 CABYRP1-201ENST00000465493 1045 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 NDUFB4P9-201ENST00000511646 388 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.55□□□□□ -1.84
USP47Q96K76 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.55□□□□□ -1.84
USP47Q96K76 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.55□□□□□ -1.84
USP47Q96K76 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 AC023043.3-201ENST00000593113 385 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 AC079610.2-201ENST00000604818 690 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 BX664608.1-201ENST00000610519 487 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.55□□□□□ -1.84
USP47Q96K76 C2orf27A-204ENST00000623058 969 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.55□□□□□ -1.84
USP47Q96K76 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
USP47Q96K76 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP47Q96K76 ZNF33CP-201ENST00000432492 2030 ntBASIC3.55□□□□□ -1.84
USP47Q96K76 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP47Q96K76 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP47Q96K76 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
USP47Q96K76 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP47Q96K76 MIR504-201ENST00000385065 83 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP47Q96K76 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.54□□□□□ -1.84
USP47Q96K76 AC009963.1-201ENST00000417265 157 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 AL049610.1-201ENST00000423374 372 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 FCF1P1-201ENST00000432690 571 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 MTND2P6-201ENST00000455337 1030 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 Y_RNA.638-201ENST00000459374 113 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.54□□□□□ -1.84
USP47Q96K76 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.54□□□□□ -1.84
USP47Q96K76 RN7SKP24-201ENST00000515888 284 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 UBTFL10-201ENST00000528532 562 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 AL391156.1-201ENST00000554965 554 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.54□□□□□ -1.84
USP47Q96K76 AC010620.2-201ENST00000600135 313 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 NTAN1P1-201ENST00000603150 646 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 AC004775.1-201ENST00000607389 753 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 AC121761.2-201ENST00000617300 689 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP47Q96K76 AL161431.1-201ENST00000618966 4205 ntBASIC3.54□□□□□ -1.84
USP47Q96K76 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.54□□□□□ -1.84
USP47Q96K76 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms