Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 NPM1P41-201ENST00000512920 831 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC091163.3-201ENST00000518269 1144 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 NDUFA5P2-201ENST00000519723 344 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 OR4H12P-201ENST00000556269 907 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC090615.1-201ENST00000577519 154 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AC015726.1-201ENST00000602353 681 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 RMST_8.1-201ENST00000610287 165 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL138478.1-201ENST00000612252 832 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL596245.1-201ENST00000618994 362 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 AL354798.1-201ENST00000622505 329 ntBASIC3.65□□□□□ -1.83
VMP1Q96GC9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
VMP1Q96GC9 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VMP1Q96GC9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 RNU6-28P-201ENST00000362378 107 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 Y_RNA.408-201ENST00000383987 102 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 ZNF602P-201ENST00000405929 924 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL355143.1-201ENST00000407101 841 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL590084.1-201ENST00000407885 387 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC068533.2-201ENST00000411872 306 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 RANP8-201ENST00000444720 713 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL049829.1-201ENST00000465411 156 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC104472.2-201ENST00000469035 601 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 SETP14-201ENST00000497538 873 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VMP1Q96GC9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC096571.1-202ENST00000506634 735 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 MTND4LP31-201ENST00000514859 294 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC087369.1-201ENST00000520775 996 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 CYCSP30-201ENST00000546447 172 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 MIR3921-201ENST00000577308 85 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 MIR5685-201ENST00000579080 79 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 VN1R78P-201ENST00000597393 564 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 AL138880.2-201ENST00000616214 239 ntBASIC3.64□□□□□ -1.83
VMP1Q96GC9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.64□□□□□ -1.83
VMP1Q96GC9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VMP1Q96GC9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VMP1Q96GC9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VMP1Q96GC9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VMP1Q96GC9 SNORD116-12-201ENST00000384468 92 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 MIR184-201ENST00000384962 84 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 SKINT1L-201ENST00000401057 817 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 CCDC58P2-201ENST00000417131 366 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 RNF2P1-201ENST00000442955 1010 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AL358794.1-201ENST00000445689 381 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 RPL18AP17-201ENST00000455326 198 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 RPL32P34-201ENST00000486380 400 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 RPL7P23-201ENST00000493874 747 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC111000.2-201ENST00000507775 550 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 XKRY-201ENST00000510392 1100 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC022483.1-201ENST00000514020 567 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VMP1Q96GC9 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
VMP1Q96GC9 AL031985.2-201ENST00000600955 480 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 AC004987.4-201ENST00000603383 338 ntBASIC3.63□□□□□ -1.83
VMP1Q96GC9 AF129408.1-201ENST00000608767 431 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms