Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
ERCC4Q92889 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 AL133412.1-201ENST00000380194 2992 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC4Q92889 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ERCC4Q92889 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC4Q92889 LINC00622-201ENST00000562811 1570 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 SNORA72.1-201ENST00000363485 129 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 RNU6-744P-201ENST00000365557 107 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 RNU6-1316P-201ENST00000384242 108 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ERCC4Q92889 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 RN7SKP106-201ENST00000410832 272 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 RPS20P14-201ENST00000412545 360 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 MTATP6P27-201ENST00000416987 621 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC4Q92889 CEACAMP1-201ENST00000434624 1035 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 MTCYBP45-201ENST00000435243 565 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 FAM103A2P-201ENST00000444122 354 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AC012671.1-201ENST00000451912 203 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 CEACAMP6-201ENST00000452007 574 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC013356.1-201ENST00000489027 564 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC008897.1-201ENST00000494006 347 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 OR51K1P-201ENST00000510214 950 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AC114781.4-201ENST00000513707 639 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 SNORA20.3-201ENST00000516880 132 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC008694.2-201ENST00000517591 306 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC4Q92889 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 DEFB109D-201ENST00000529497 240 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 AC011477.5-201ENST00000586571 259 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.01□□□□□ -1.61
ERCC4Q92889 BNIP3P33-201ENST00000598912 569 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 BBIP1P1-201ENST00000602999 279 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 BPIFA4P-203ENST00000603168 689 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC011816.2-201ENST00000607089 556 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC008536.2-201ENST00000607284 349 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.01□□□□□ -1.61
ERCC4Q92889 MIR6864-201ENST00000617935 70 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 AC011978.2-201ENST00000569835 2054 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 ZNF137P-201ENST00000456718 1920 ntBASIC5.01□□□□□ -1.61
ERCC4Q92889 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
ERCC4Q92889 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ERCC4Q92889 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5□□□□□ -1.61
ERCC4Q92889 RNU6-797P-201ENST00000363101 109 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RNU6-694P-201ENST00000364071 147 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RNA5SP22-201ENST00000365393 109 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ERCC4Q92889 RNU6-730P-201ENST00000383954 104 ntBASIC5□□□□□ -1.61
ERCC4Q92889 MIR3074-201ENST00000384885 81 ntBASIC5□□□□□ -1.61
ERCC4Q92889 Z98745.1-201ENST00000402553 494 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RNU2-21P-201ENST00000410368 188 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RPL37P18-201ENST00000411602 243 ntBASIC5□□□□□ -1.61
ERCC4Q92889 HMGB3P20-201ENST00000417997 600 ntBASIC5□□□□□ -1.61
ERCC4Q92889 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ERCC4Q92889 MTCO2P5-201ENST00000422621 426 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AL353777.1-201ENST00000425552 326 ntBASIC5□□□□□ -1.61
ERCC4Q92889 ISCA1P6-201ENST00000427740 390 ntBASIC5□□□□□ -1.61
ERCC4Q92889 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5□□□□□ -1.61
ERCC4Q92889 MTCO2P11-201ENST00000431069 680 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5□□□□□ -1.61
ERCC4Q92889 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5□□□□□ -1.61
ERCC4Q92889 SNRPEP8-201ENST00000442866 260 ntBASIC5□□□□□ -1.61
ERCC4Q92889 CEACAMP9-201ENST00000442990 513 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5□□□□□ -1.61
ERCC4Q92889 AC132479.1-201ENST00000449160 144 ntBASIC5□□□□□ -1.61
ERCC4Q92889 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5□□□□□ -1.61
ERCC4Q92889 MTND3P10-201ENST00000450967 341 ntBASIC5□□□□□ -1.61
ERCC4Q92889 FABP3P2-201ENST00000453169 399 ntBASIC5□□□□□ -1.61
ERCC4Q92889 MTCO3P20-201ENST00000454926 688 ntBASIC5□□□□□ -1.61
ERCC4Q92889 C1DP4-201ENST00000455429 424 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RPS27AP17-201ENST00000463344 455 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5□□□□□ -1.61
ERCC4Q92889 RPS29P25-201ENST00000481709 171 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC041039.1-201ENST00000485656 536 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5□□□□□ -1.61
ERCC4Q92889 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5□□□□□ -1.61
ERCC4Q92889 Y_RNA.702-201ENST00000516843 96 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AP003181.2-201ENST00000528941 181 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC069240.1-201ENST00000548774 375 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5□□□□□ -1.61
ERCC4Q92889 AC107954.1-201ENST00000565906 727 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AC009101.1-201ENST00000568135 242 ntBASIC5□□□□□ -1.61
ERCC4Q92889 RPL23AP92-201ENST00000603609 255 ntBASIC5□□□□□ -1.61
ERCC4Q92889 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5□□□□□ -1.61
ERCC4Q92889 AC004825.2-201ENST00000616634 455 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms