Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC073968.1-201ENST00000618594 637 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.36□□□□□ -1.71
USP38Q8NB14 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
USP38Q8NB14 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.36□□□□□ -1.71
USP38Q8NB14 AP002001.2-201ENST00000529025 1469 ntBASIC4.36□□□□□ -1.71
USP38Q8NB14 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
USP38Q8NB14 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 Y_RNA.18-201ENST00000362461 102 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.35□□□□□ -1.71
USP38Q8NB14 MTND4LP20-201ENST00000402379 270 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 MIR1183-201ENST00000408856 89 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 RNU4-72P-201ENST00000410754 173 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 Z97055.1-201ENST00000419730 712 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AL049610.1-201ENST00000423374 372 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AF228730.2-201ENST00000438784 848 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC005297.2-201ENST00000450430 606 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC087312.1-201ENST00000471411 480 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 RN7SL429P-201ENST00000479090 223 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 RN7SL489P-201ENST00000486185 223 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 RN7SL327P-201ENST00000488659 223 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 RPF2P2-201ENST00000504693 896 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
USP38Q8NB14 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.35□□□□□ -1.71
USP38Q8NB14 MIR5186-201ENST00000577504 120 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.35□□□□□ -1.71
USP38Q8NB14 VN1R90P-201ENST00000595717 726 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AL109653.1-201ENST00000603091 248 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 AC104662.1-201ENST00000604448 511 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC005344.1-201ENST00000613391 459 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 RN7SL853P-201ENST00000617250 223 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.35□□□□□ -1.71
USP38Q8NB14 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 AC068057.2-201ENST00000624047 895 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 MTND4P34-201ENST00000572715 1371 ntBASIC4.35□□□□□ -1.71
USP38Q8NB14 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
USP38Q8NB14 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
USP38Q8NB14 BDP1P-201ENST00000582658 1990 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
USP38Q8NB14 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 RNA5SP432-201ENST00000362480 116 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 RNA5SP267-201ENST00000364893 126 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
USP38Q8NB14 CYCSP45-201ENST00000402289 315 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 MIR1251-201ENST00000408552 70 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.34□□□□□ -1.71
USP38Q8NB14 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 AC092832.1-201ENST00000422934 400 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 ZYG11AP1-201ENST00000430329 837 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AL365396.1-201ENST00000430854 671 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USP38Q8NB14 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 EEF1E1P1-201ENST00000446998 430 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 ARPC3P2-201ENST00000457786 533 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AC072039.1-201ENST00000477611 581 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AC069499.1-201ENST00000489433 509 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 AC106872.2-201ENST00000494303 480 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 RNU6-759P-201ENST00000516740 103 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 RNU6-232P-201ENST00000517144 64 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 HSPE1P3-201ENST00000559254 309 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AC015726.1-201ENST00000602353 681 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 AP000811.1-201ENST00000603803 651 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.34□□□□□ -1.71
USP38Q8NB14 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.34□□□□□ -1.71
USP38Q8NB14 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.34□□□□□ -1.71
USP38Q8NB14 AP004289.2-201ENST00000444413 1457 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms