Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AL161781.1-201ENST00000354277 403 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 RNU6-1298P-201ENST00000362456 101 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.183-201ENST00000363882 113 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.398-201ENST00000383952 99 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 RNU6-441P-201ENST00000384545 106 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 RN7SKP125-201ENST00000410481 302 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AL445928.1-201ENST00000435545 222 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 BTF3P6-201ENST00000448054 499 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC087477.1-201ENST00000465747 340 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC004453.1-201ENST00000487895 408 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 RPL17P19-201ENST00000489069 552 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 RN7SL547P-201ENST00000490793 290 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC020893.1-201ENST00000502452 580 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC007991.1-201ENST00000522680 631 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC005341.1-201ENST00000571086 708 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC060771.1-201ENST00000582031 164 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AL353997.4-201ENST00000586196 166 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 VN1R91P-201ENST00000594377 169 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 AC025034.2-201ENST00000623264 286 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 PROS2P-201ENST00000474651 1951 ntBASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
CTC1Q2NKJ3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC079753.1-201ENST00000623243 3868 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 TRIM51GP-201ENST00000534741 1350 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RNU6-611P-201ENST00000384276 104 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.576-201ENST00000384781 102 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 EIF5P1-201ENST00000400019 1231 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RNU6-130P-201ENST00000411112 103 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RPL23AP27-201ENST00000415161 451 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AL139148.1-201ENST00000427122 680 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC004866.2-201ENST00000438285 481 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 OR7E116P-201ENST00000448529 957 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 HMGB1P4-201ENST00000455362 567 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RPS15AP1-201ENST00000457423 391 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC093267.1-201ENST00000489176 961 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC104806.1-201ENST00000508720 308 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RNU6-202P-201ENST00000515998 96 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.662-201ENST00000516028 97 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 MRPS36P4-201ENST00000534436 298 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC109446.1-201ENST00000566172 220 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 MIR3941-201ENST00000582572 103 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 RPS29P30-201ENST00000600975 111 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AP001486.3-201ENST00000615334 372 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 MIR6837-201ENST00000620884 64 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 AC232271.1-201ENST00000602455 2715 ntBASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
CTC1Q2NKJ3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 GTF2IP4-201ENST00000453092 2054 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RN7SKP115-201ENST00000363177 317 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 Y_RNA.353-201ENST00000365440 108 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 RNU6-47P-201ENST00000383866 107 ntBASIC6.23□□□□□ -1.41
CTC1Q2NKJ3 AL359643.1-201ENST00000404109 423 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms