Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RPL31P50-201ENST00000471002 296 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AP000563.1-201ENST00000490865 758 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 RPL5P23-201ENST00000496040 868 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AC139783.2-201ENST00000504847 1145 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK3Q00526 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDK3Q00526 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.67□□□□□ -1.82
CDK3Q00526 MTND2P38-201ENST00000522536 667 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK3Q00526 MIR4444-1-201ENST00000581696 74 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK3Q00526 MIR4444-2-201ENST00000584390 74 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.67□□□□□ -1.82
CDK3Q00526 AP000811.1-201ENST00000603803 651 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AC025811.1-201ENST00000604312 472 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AL390208.1-201ENST00000605885 644 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 SNORA51-201ENST00000606420 132 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 RNU6-88P-201ENST00000606801 100 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 MIR92B-201ENST00000607575 96 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC024560.3-201ENST00000608482 349 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC007671.2-201ENST00000637344 619 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.67□□□□□ -1.82
CDK3Q00526 AC087359.1-201ENST00000508335 1740 ntBASIC3.67□□□□□ -1.82
CDK3Q00526 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.67□□□□□ -1.82
CDK3Q00526 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK3Q00526 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 AC007390.2-201ENST00000606229 3803 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 RPL21P132-201ENST00000331267 462 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 RNU6-28P-201ENST00000362378 107 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 Y_RNA.18-201ENST00000362461 102 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 RNU6-462P-201ENST00000362659 105 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 SNORD51-201ENST00000384320 80 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL603766.1-201ENST00000407763 664 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 ATP5A1P2-201ENST00000412323 255 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK3Q00526 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.66□□□□□ -1.82
CDK3Q00526 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 RPS6P12-201ENST00000432491 726 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 AL117351.1-201ENST00000438864 766 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 RPS3AP46-201ENST00000448352 682 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 RNU7-125P-201ENST00000458760 62 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 HMGB1P25-201ENST00000468402 607 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC069499.1-201ENST00000489433 509 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK3Q00526 RN7SKP18-201ENST00000516005 275 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 RNA5SP216-201ENST00000516111 123 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK3Q00526 OR7K1P-201ENST00000546439 926 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK3Q00526 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.66□□□□□ -1.82
CDK3Q00526 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.66□□□□□ -1.82
CDK3Q00526 SNRPGP15-201ENST00000600149 222 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL357094.1-201ENST00000603845 844 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL163642.2-201ENST00000604722 1019 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC018714.1-201ENST00000605028 208 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL357080.1-201ENST00000617394 239 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 Z99129.2-201ENST00000619967 314 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AC018816.2-201ENST00000621460 353 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 AL356596.1-201ENST00000624230 379 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 AL031985.3-201ENST00000565390 2449 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDK3Q00526 AC027287.1-201ENST00000553115 1453 ntBASIC3.66□□□□□ -1.82
CDK3Q00526 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.66□□□□□ -1.82
CDK3Q00526 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDK3Q00526 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDK3Q00526 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDK3Q00526 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CDK3Q00526 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.65□□□□□ -1.83
CDK3Q00526 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms