Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 POU5F1P7-201ENST00000508759 541 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
ABCA4P78363 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.08□□□□□ -2.08
ABCA4P78363 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.08□□□□□ -2.08
ABCA4P78363 AC004696.1-201ENST00000614345 607 ntBASIC2.08□□□□□ -2.08
ABCA4P78363 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
ABCA4P78363 RNU6-14P-201ENST00000384630 106 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 HMGB1P13-201ENST00000406019 642 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AL121882.1-201ENST00000422893 417 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.07□□□□□ -2.08
ABCA4P78363 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 AC078918.1-201ENST00000498515 228 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 SNORA9.3-201ENST00000516383 129 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC2.07□□□□□ -2.08
ABCA4P78363 NF1P5-201ENST00000588287 448 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 VN1R9P-201ENST00000614184 867 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 MTND5P6-201ENST00000422338 1798 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 RNF6P1-201ENST00000444889 1784 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AC000367.1-201ENST00000452711 1766 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 Y_RNA.40-201ENST00000362645 93 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 AC048351.1-201ENST00000420064 602 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.07□□□□□ -2.08
ABCA4P78363 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.07□□□□□ -2.08
ABCA4P78363 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AC025260.1-201ENST00000548858 430 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AL845331.3-202ENST00000562856 261 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 ZNF192P1-203ENST00000565888 810 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 RNA5SP108-201ENST00000605921 117 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AC105429.2-201ENST00000610567 517 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 AC104237.2-201ENST00000612456 443 ntBASIC2.07□□□□□ -2.08
ABCA4P78363 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.07□□□□□ -2.08
ABCA4P78363 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ABCA4P78363 RNU1-100P-201ENST00000365255 165 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC012498.1-201ENST00000424037 437 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.06□□□□□ -2.08
ABCA4P78363 AC093151.1-201ENST00000427711 313 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 RPL23AP74-201ENST00000437246 471 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 UBE2V2P4-201ENST00000447495 259 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 RPL30P9-201ENST00000465586 330 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.06□□□□□ -2.08
ABCA4P78363 AC021269.2-201ENST00000532318 330 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.06□□□□□ -2.08
ABCA4P78363 OR11H5P-201ENST00000554039 926 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ABCA4P78363 AC116563.2-201ENST00000624751 535 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC008264.2-201ENST00000610193 3731 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCA4P78363 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.06□□□□□ -2.08
ABCA4P78363 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ABCA4P78363 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ABCA4P78363 AC138915.3-201ENST00000562908 1389 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCA4P78363 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCA4P78363 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ABCA4P78363 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ABCA4P78363 MIR7-2-201ENST00000384970 110 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AL158825.1-201ENST00000414735 521 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 RPL30P3-201ENST00000424262 333 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 MTCO2P17-201ENST00000424336 677 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 RN7SKP210-201ENST00000459176 261 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC126182.1-201ENST00000478134 357 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 RPL9P33-201ENST00000484311 566 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC108729.3-201ENST00000513484 108 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.06□□□□□ -2.08
ABCA4P78363 MIR4498-201ENST00000577599 66 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.06□□□□□ -2.08
ABCA4P78363 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.06□□□□□ -2.08
ABCA4P78363 AC010620.2-201ENST00000600135 313 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AC018754.1-201ENST00000607486 925 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 AL136981.2-201ENST00000617319 734 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 XIST_intron.1-201ENST00000619444 68 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 Z99129.2-201ENST00000619967 314 ntBASIC2.06□□□□□ -2.08
ABCA4P78363 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ABCA4P78363 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 RNA5SP213-201ENST00000391031 106 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 RNU7-27P-201ENST00000459281 62 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 RNA5SP281-201ENST00000516504 135 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 OR5D17P-201ENST00000531492 978 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.05□□□□□ -2.08
ABCA4P78363 AC044913.1-201ENST00000557200 430 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.05□□□□□ -2.08
ABCA4P78363 AC117529.2-201ENST00000512159 2068 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ABCA4P78363 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC2.05□□□□□ -2.08
ABCA4P78363 Y_RNA.62-201ENST00000362840 99 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 Y_RNA.118-201ENST00000363300 101 ntBASIC2.05□□□□□ -2.08
ABCA4P78363 RNU1-91P-201ENST00000364746 163 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms