Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC034222.1-201ENST00000494052 532 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDL3P58872 RN7SKP289-201ENST00000517244 295 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDL3P58872 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDL3P58872 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDL3P58872 AC068790.5-201ENST00000602741 355 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC013444.2-201ENST00000603317 787 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AP000811.1-201ENST00000603803 651 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC092354.2-201ENST00000607786 514 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC002550.2-201ENST00000621246 394 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AL353748.2-201ENST00000622148 471 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDL3P58872 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDL3P58872 ZNF285B-201ENST00000561698 1767 ntBASIC4.65□□□□□ -1.66
RHBDL3P58872 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDL3P58872 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
RHBDL3P58872 AL391994.1-201ENST00000254724 282 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RNU6-343P-201ENST00000364709 104 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RNU6-744P-201ENST00000365557 107 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDL3P58872 RNU6-1316P-201ENST00000384242 108 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RNU6-882P-201ENST00000391025 103 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RNA5SP44-201ENST00000410446 133 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
RHBDL3P58872 AC005005.2-201ENST00000420779 380 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AL139247.1-201ENST00000422768 325 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 MTCO1P39-201ENST00000426148 480 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC017083.1-201ENST00000428093 483 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 MTND5P25-201ENST00000430499 799 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC108734.1-201ENST00000439549 399 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AL606662.1-201ENST00000445763 553 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDL3P58872 UBDP1-202ENST00000457888 382 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDL3P58872 AC098862.1-201ENST00000504991 413 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC025554.1-201ENST00000505641 188 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDL3P58872 SNORA31.8-201ENST00000516327 108 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 IGKV2-38-201ENST00000517443 247 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 PAICSP4-201ENST00000517543 1253 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDL3P58872 SETP2-201ENST00000553886 926 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 GTF2IP22-201ENST00000554443 182 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.65□□□□□ -1.67
RHBDL3P58872 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDL3P58872 MIR4644-201ENST00000579929 84 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC021171.1-201ENST00000603137 706 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 SNORA51-201ENST00000606420 132 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC024560.3-201ENST00000608482 349 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 AC131159.1-201ENST00000621854 213 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
RHBDL3P58872 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.65□□□□□ -1.67
RHBDL3P58872 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDL3P58872 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.67
RHBDL3P58872 AL031985.3-201ENST00000565390 2449 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
RHBDL3P58872 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDL3P58872 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDL3P58872 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDL3P58872 RNA5SP97-201ENST00000365006 84 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 DEFB109C-201ENST00000382575 264 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 DEFB109B-201ENST00000382656 264 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 MIR449B-201ENST00000384995 97 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 MIR1305-201ENST00000408300 86 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 MIR1251-201ENST00000408552 70 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 RNU2-43P-201ENST00000410306 190 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 RAP1BP1-201ENST00000412709 553 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 RPL7AP73-201ENST00000413490 353 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AL591503.2-201ENST00000442314 1005 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDL3P58872 HMGN2P16-201ENST00000456802 261 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDL3P58872 SNORD121B-201ENST00000458838 81 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AL133162.1-201ENST00000463228 453 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 SNRPGP3-201ENST00000469405 227 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AC021382.1-201ENST00000483523 359 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDL3P58872 VN1R104P-201ENST00000505115 1009 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 POU5F1P7-201ENST00000508759 541 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 PPBPP1-201ENST00000510807 373 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC105914.1-201ENST00000511798 226 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC022483.1-201ENST00000514020 567 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 RNU1-95P-201ENST00000516357 160 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 RNU1-128P-201ENST00000516704 160 ntBASIC4.64□□□□□ -1.67
RHBDL3P58872 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDL3P58872 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms