Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 ELOCP35-201ENST00000604289 336 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC245297.2-201ENST00000610119 565 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC021755.4-201ENST00000616620 456 ntBASIC3.71□□□□□ -1.82
LHX1P48742 AC009159.2-201ENST00000617603 606 ntBASIC3.71□□□□□ -1.82
LHX1P48742 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 CR381670.1-201ENST00000624291 1693 ntBASIC3.71□□□□□ -1.82
LHX1P48742 OTUD4P1-201ENST00000237841 3067 ntBASIC3.71□□□□□ -1.82
LHX1P48742 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LHX1P48742 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
LHX1P48742 AC068647.1-201ENST00000489539 2265 ntBASIC3.7□□□□□ -1.82
LHX1P48742 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LHX1P48742 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX1P48742 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX1P48742 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 RNA5SP235-201ENST00000365411 114 ntBASIC3.7□□□□□ -1.82
LHX1P48742 RNU6-157P-201ENST00000383957 107 ntBASIC3.7□□□□□ -1.82
LHX1P48742 MIR490-201ENST00000384865 128 ntBASIC3.7□□□□□ -1.82
LHX1P48742 MIR34B-201ENST00000385076 84 ntBASIC3.7□□□□□ -1.82
LHX1P48742 RPL31P1-201ENST00000398116 372 ntBASIC3.7□□□□□ -1.82
LHX1P48742 MIR1284-201ENST00000408337 120 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 RPL7P53-201ENST00000421245 739 ntBASIC3.7□□□□□ -1.82
LHX1P48742 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.7□□□□□ -1.82
LHX1P48742 MTND4P6-201ENST00000438297 472 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX1P48742 RPL26P28-201ENST00000451325 435 ntBASIC3.7□□□□□ -1.82
LHX1P48742 RPS20P24-201ENST00000457473 361 ntBASIC3.7□□□□□ -1.82
LHX1P48742 RPL7P49-201ENST00000471402 708 ntBASIC3.7□□□□□ -1.82
LHX1P48742 SYPL1P1-201ENST00000473622 768 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC068305.1-201ENST00000497406 726 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC114981.1-201ENST00000503897 678 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC104090.1-201ENST00000506341 1171 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC021146.8-201ENST00000507455 733 ntBASIC3.7□□□□□ -1.82
LHX1P48742 USP9YP5-201ENST00000511770 630 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AL139174.1-201ENST00000531489 886 ntBASIC3.7□□□□□ -1.82
LHX1P48742 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.7□□□□□ -1.82
LHX1P48742 AC026333.2-201ENST00000542164 106 ntBASIC3.7□□□□□ -1.82
LHX1P48742 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.7□□□□□ -1.82
LHX1P48742 DUXAP1-201ENST00000556632 463 ntBASIC3.7□□□□□ -1.82
LHX1P48742 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.7□□□□□ -1.82
LHX1P48742 HSPE1P3-201ENST00000559254 309 ntBASIC3.7□□□□□ -1.82
LHX1P48742 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX1P48742 AL354943.1-201ENST00000572103 781 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC099489.2-201ENST00000574976 260 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.7□□□□□ -1.82
LHX1P48742 AC090616.5-202ENST00000582111 297 ntBASIC3.7□□□□□ -1.82
LHX1P48742 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC245036.5-201ENST00000596330 847 ntBASIC3.7□□□□□ -1.82
LHX1P48742 AC004987.4-201ENST00000603383 338 ntBASIC3.7□□□□□ -1.82
LHX1P48742 RPL23AP92-201ENST00000603609 255 ntBASIC3.7□□□□□ -1.82
LHX1P48742 BNIP3P11-201ENST00000603878 563 ntBASIC3.7□□□□□ -1.82
LHX1P48742 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.7□□□□□ -1.82
LHX1P48742 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.7□□□□□ -1.82
LHX1P48742 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.7□□□□□ -1.82
LHX1P48742 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LHX1P48742 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
LHX1P48742 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 AL079343.1-201ENST00000572358 1771 ntBASIC3.69□□□□□ -1.82
LHX1P48742 MTCO1P14-201ENST00000441695 1559 ntBASIC3.69□□□□□ -1.82
LHX1P48742 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
LHX1P48742 RNU6-989P-201ENST00000362756 107 ntBASIC3.69□□□□□ -1.82
LHX1P48742 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LHX1P48742 RPL23AP29-201ENST00000397284 453 ntBASIC3.69□□□□□ -1.82
LHX1P48742 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LHX1P48742 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 AC012065.2-201ENST00000421295 375 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AP000907.1-201ENST00000428428 510 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC097713.2-201ENST00000430199 356 ntBASIC3.69□□□□□ -1.82
LHX1P48742 MTND1P32-201ENST00000433043 938 ntBASIC3.69□□□□□ -1.82
LHX1P48742 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 AC005019.1-201ENST00000436455 431 ntBASIC3.69□□□□□ -1.82
LHX1P48742 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.69□□□□□ -1.82
LHX1P48742 USP9YP34-201ENST00000453983 808 ntBASIC3.69□□□□□ -1.82
LHX1P48742 HMGB3P30-201ENST00000457863 606 ntBASIC3.69□□□□□ -1.82
LHX1P48742 snoU13.3-201ENST00000459441 104 ntBASIC3.69□□□□□ -1.82
LHX1P48742 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.69□□□□□ -1.82
LHX1P48742 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
LHX1P48742 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 Y_RNA.717-201ENST00000517106 92 ntBASIC3.69□□□□□ -1.82
LHX1P48742 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.69□□□□□ -1.82
LHX1P48742 AP006245.1-201ENST00000522549 120 ntBASIC3.69□□□□□ -1.82
LHX1P48742 PDCL2P2-201ENST00000533651 189 ntBASIC3.69□□□□□ -1.82
LHX1P48742 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.69□□□□□ -1.82
LHX1P48742 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.69□□□□□ -1.82
LHX1P48742 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms