Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC090953.1-201ENST00000604305 1092 ntBASIC3□□□□□ -1.93
SCN4AP35499 AC135803.1-201ENST00000608748 565 ntBASIC3□□□□□ -1.93
SCN4AP35499 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3□□□□□ -1.93
SCN4AP35499 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN4AP35499 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCN4AP35499 RNU6-317P-201ENST00000384031 107 ntBASIC3□□□□□ -1.93
SCN4AP35499 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3□□□□□ -1.93
SCN4AP35499 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3□□□□□ -1.93
SCN4AP35499 AC023512.1-201ENST00000444513 499 ntBASIC3□□□□□ -1.93
SCN4AP35499 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3□□□□□ -1.93
SCN4AP35499 AL157827.1-201ENST00000447622 132 ntBASIC3□□□□□ -1.93
SCN4AP35499 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3□□□□□ -1.93
SCN4AP35499 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3□□□□□ -1.93
SCN4AP35499 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SCN4AP35499 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3□□□□□ -1.93
SCN4AP35499 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3□□□□□ -1.93
SCN4AP35499 AC005046.1-201ENST00000608515 625 ntBASIC3□□□□□ -1.93
SCN4AP35499 CR589904.2-201ENST00000612533 440 ntBASIC3□□□□□ -1.93
SCN4AP35499 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3□□□□□ -1.93
SCN4AP35499 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SCN4AP35499 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SCN4AP35499 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN4AP35499 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.99□□□□□ -1.93
SCN4AP35499 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SCN4AP35499 MIR92A2-201ENST00000385299 75 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 MTATP6P11-201ENST00000428071 670 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 AL353898.1-201ENST00000444055 238 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.99□□□□□ -1.93
SCN4AP35499 TPRKBP1-201ENST00000456243 481 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC087385.1-201ENST00000475062 312 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.99□□□□□ -1.93
SCN4AP35499 SUMO1P1-201ENST00000497904 306 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.99□□□□□ -1.93
SCN4AP35499 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC104997.1-201ENST00000519761 717 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC100870.1-201ENST00000522035 505 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 IGHV3-76-201ENST00000522465 295 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 AP001317.1-201ENST00000531194 960 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.99□□□□□ -1.93
SCN4AP35499 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
SCN4AP35499 MIR3605-201ENST00000583214 100 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.99□□□□□ -1.93
SCN4AP35499 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN4AP35499 AC080128.1-201ENST00000474389 1917 ntBASIC2.99□□□□□ -1.93
SCN4AP35499 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SCN4AP35499 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SCN4AP35499 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 MIR181B1-201ENST00000385240 110 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 ST13P20-201ENST00000447996 1065 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 CABYRP1-201ENST00000465493 1045 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.98□□□□□ -1.93
SCN4AP35499 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN4AP35499 RN7SKP282-201ENST00000516824 299 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN4AP35499 OR8L1P-201ENST00000534005 955 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 AADACP1-206ENST00000561502 1193 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.98□□□□□ -1.93
SCN4AP35499 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 XIST_intron.1-201ENST00000619444 68 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC073348.1-201ENST00000623002 331 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN4AP35499 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCN4AP35499 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN4AP35499 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 OR5T3-201ENST00000303059 1023 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCN4AP35499 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 YWHAZP7-201ENST00000436906 631 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 RPL34P26-201ENST00000445636 354 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.98□□□□□ -1.93
SCN4AP35499 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN4AP35499 AC074029.1-201ENST00000552531 1044 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC027104.1-201ENST00000563702 681 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC022884.3-201ENST00000579571 248 ntBASIC2.98□□□□□ -1.93
SCN4AP35499 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCN4AP35499 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.98□□□□□ -1.93
SCN4AP35499 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SCN4AP35499 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.97□□□□□ -1.93
SCN4AP35499 RNU6-146P-201ENST00000384602 108 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 RPL31P45-201ENST00000419532 356 ntBASIC2.97□□□□□ -1.93
SCN4AP35499 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms