Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC107982.1-201ENST00000507171 1300 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
POLR2AP24928 RNY3P3-201ENST00000363816 102 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC008850.1-201ENST00000427546 362 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 SEPT7P5-201ENST00000434048 306 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 RPL7P54-201ENST00000438336 674 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR2AP24928 RNU7-27P-201ENST00000459281 62 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC114967.1-201ENST00000504890 259 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR2AP24928 SCARNA15.1-201ENST00000516384 125 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.56□□□□□ -1.68
POLR2AP24928 MTND1P35-201ENST00000526739 508 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
POLR2AP24928 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR2AP24928 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR2AP24928 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.56□□□□□ -1.68
POLR2AP24928 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
POLR2AP24928 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.56□□□□□ -1.68
POLR2AP24928 AC027290.2-201ENST00000623210 18662 ntBASIC4.56□□□□□ -1.68
POLR2AP24928 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
POLR2AP24928 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR2AP24928 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
POLR2AP24928 RNU5F-7P-201ENST00000363696 115 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 RNU4-7P-201ENST00000364758 141 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 Y_RNA.582-201ENST00000391023 95 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 PIGPP2-201ENST00000411569 458 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 PIGFP2-201ENST00000421400 651 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 ATP5HP2-201ENST00000433885 485 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 RPL7P31-201ENST00000450192 724 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR2AP24928 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.55□□□□□ -1.68
POLR2AP24928 AP001486.1-201ENST00000463339 476 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AC010307.1-201ENST00000467206 836 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR2AP24928 AC108078.1-201ENST00000508073 725 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AC024589.1-201ENST00000512207 263 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.55□□□□□ -1.68
POLR2AP24928 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR2AP24928 AC137800.2-201ENST00000574375 120 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.55□□□□□ -1.68
POLR2AP24928 MIR7973-1-201ENST00000614683 76 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AP001506.1-201ENST00000615444 211 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 AC108479.2-201ENST00000617314 601 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.55□□□□□ -1.68
POLR2AP24928 MIR3662-201ENST00000637030 95 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR2AP24928 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
POLR2AP24928 THAP12P5-201ENST00000405864 2275 ntBASIC4.55□□□□□ -1.68
POLR2AP24928 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
POLR2AP24928 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.55□□□□□ -1.68
POLR2AP24928 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
POLR2AP24928 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
POLR2AP24928 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
POLR2AP24928 OR10J6P-201ENST00000289731 930 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 SNRPEP3-201ENST00000338402 276 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 Y_RNA.25-201ENST00000362528 102 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.54□□□□□ -1.68
POLR2AP24928 VDAC1P9-201ENST00000412766 841 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 CBX1P3-201ENST00000413296 527 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR2AP24928 AL035423.1-201ENST00000420331 213 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR2AP24928 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
POLR2AP24928 UBE2DNL-203ENST00000474922 222 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 RPS29P2-201ENST00000479278 136 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 RPS29P25-201ENST00000481709 171 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR2AP24928 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
POLR2AP24928 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.54□□□□□ -1.68
POLR2AP24928 AC022483.1-201ENST00000514020 567 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 AC090151.1-201ENST00000520784 730 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.54□□□□□ -1.68
POLR2AP24928 DUX4L52-201ENST00000549363 777 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 SNORD39.2-201ENST00000579995 76 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.54□□□□□ -1.68
POLR2AP24928 AL162413.1-201ENST00000603198 110 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.54□□□□□ -1.68
POLR2AP24928 AC011816.2-201ENST00000607089 556 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC107214.2-201ENST00000608204 634 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC131902.3-201ENST00000611767 581 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AL359535.1-201ENST00000612100 1087 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 AC136475.10-201ENST00000620253 385 ntBASIC4.54□□□□□ -1.68
POLR2AP24928 MIR3688-2-201ENST00000636963 87 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms