Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 BTF3P5-201ENST00000457252 467 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 RNA5SP310-201ENST00000459084 116 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 RPS4XP6-201ENST00000477670 797 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL1P09341 DSTNP2-201ENST00000504533 515 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 SNORA31.8-201ENST00000516327 108 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 RNU1-45P-201ENST00000517191 141 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.05□□□□□ -2.08
CXCL1P09341 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL1P09341 AC128657.1-201ENST00000549459 145 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.05□□□□□ -2.08
CXCL1P09341 ACTR3BP3-201ENST00000565577 979 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.05□□□□□ -2.08
CXCL1P09341 MYL12BP1-201ENST00000569826 507 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 AC012493.2-201ENST00000595083 291 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 AC119501.1-201ENST00000603646 475 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 AC106791.2-201ENST00000604680 391 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 AC095031.1-201ENST00000623685 672 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.05□□□□□ -2.08
CXCL1P09341 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.05□□□□□ -2.08
CXCL1P09341 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL1P09341 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CXCL1P09341 AC000403.1-201ENST00000613696 3585 ntBASIC2.05□□□□□ -2.08
CXCL1P09341 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CXCL1P09341 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CXCL1P09341 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CXCL1P09341 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CXCL1P09341 RNA5SP258-201ENST00000362750 119 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 RNU6-263P-201ENST00000363811 107 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CXCL1P09341 Y_RNA.493-201ENST00000384422 102 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 SNORA1.3-201ENST00000384676 136 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 RNU2-25P-201ENST00000411041 191 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 RNF19BPX-201ENST00000426224 625 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 RPL30P14-201ENST00000482744 348 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AC093770.1-201ENST00000511559 571 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AC091826.1-201ENST00000514065 313 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CXCL1P09341 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
CXCL1P09341 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 AC139103.1-201ENST00000534696 1030 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.04□□□□□ -2.08
CXCL1P09341 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 H3F3AP1-201ENST00000559984 334 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AC012321.1-201ENST00000561622 1588 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AC010620.2-201ENST00000600135 313 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 RPL23AP92-201ENST00000603609 255 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AL645944.1-201ENST00000603857 493 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 HSPE1P14-201ENST00000605812 302 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AC015967.1-201ENST00000619893 476 ntBASIC2.04□□□□□ -2.08
CXCL1P09341 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.04□□□□□ -2.08
CXCL1P09341 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL1P09341 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL1P09341 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL1P09341 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.04□□□□□ -2.08
CXCL1P09341 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL1P09341 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CXCL1P09341 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL1P09341 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.03□□□□□ -2.08
CXCL1P09341 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL1P09341 MIR421-201ENST00000365696 85 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.03□□□□□ -2.08
CXCL1P09341 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.03□□□□□ -2.08
CXCL1P09341 RNU6-891P-201ENST00000384280 111 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CXCL1P09341 RPS4XP3-201ENST00000398541 413 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CXCL1P09341 MTND1P23-201ENST00000416931 372 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.03□□□□□ -2.08
CXCL1P09341 AL050321.1-201ENST00000432363 400 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 YWHAZP8-201ENST00000436935 731 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 RPS15AP7-201ENST00000439294 405 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AC112653.1-201ENST00000443851 386 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 VN1R34P-201ENST00000447387 883 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AL359073.1-201ENST00000448036 403 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AC234775.1-201ENST00000454247 670 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.03□□□□□ -2.08
CXCL1P09341 AC015908.1-201ENST00000478739 476 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AC135721.1-201ENST00000497954 479 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 WBP1LP4-201ENST00000505043 344 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AC008885.2-201ENST00000509506 930 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL1P09341 AC008885.1-201ENST00000514930 301 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL1P09341 AP000790.1-201ENST00000528891 737 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
CXCL1P09341 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.03□□□□□ -2.08
CXCL1P09341 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.03□□□□□ -2.08
CXCL1P09341 AC106785.1-201ENST00000565935 262 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 MIR5092-201ENST00000583139 88 ntBASIC2.03□□□□□ -2.08
CXCL1P09341 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.03□□□□□ -2.08
CXCL1P09341 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms