Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC092634.6-201ENST00000418558 192 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 YPEL5P1-201ENST00000419731 367 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC079780.1-201ENST00000428259 207 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 UBE2V1P6-201ENST00000430840 422 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC241584.1-201ENST00000438469 1241 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 RABEPKP1-201ENST00000440529 1026 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 MTCO1P48-201ENST00000448024 1096 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 COX6CP18-201ENST00000448769 222 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN9O95484 CYCSP35-201ENST00000451978 304 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC012181.1-201ENST00000479895 423 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN9O95484 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
CLDN9O95484 DYNLL1P6-201ENST00000503440 264 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC021146.5-201ENST00000503544 545 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC010265.1-201ENST00000513509 211 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC068657.1-201ENST00000520807 306 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN9O95484 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN9O95484 AC008127.2-201ENST00000549925 1075 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC010198.2-201ENST00000550612 259 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 VN1R87P-201ENST00000596706 487 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC007179.3-201ENST00000604976 235 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AL159169.3-201ENST00000608871 561 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN9O95484 AC019176.2-201ENST00000611579 315 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC008083.4-201ENST00000615076 444 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC018926.1-201ENST00000616335 435 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN9O95484 U6.105-201ENST00000637379 88 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 AC006927.2-201ENST00000639256 389 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN9O95484 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLDN9O95484 AF117829.1-206ENST00000621883 3802 ntBASIC3.1□□□□□ -1.91
CLDN9O95484 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN9O95484 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLDN9O95484 AC004972.1-201ENST00000623934 2209 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN9O95484 HMGB1P5-201ENST00000255320 642 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 RNU5B-4P-201ENST00000363508 111 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN9O95484 RNU6-657P-201ENST00000383904 107 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 SNORA51.6-201ENST00000384151 125 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 RNVU1-14-201ENST00000384770 164 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 MIR217-201ENST00000384817 110 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 AC007899.1-201ENST00000412776 775 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN9O95484 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN9O95484 MTCO3P1-205ENST00000422088 832 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN9O95484 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN9O95484 FTH1P1-201ENST00000437933 532 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 PRDX3P3-201ENST00000447765 522 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC104978.1-201ENST00000449387 391 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 ELOCP23-201ENST00000452014 332 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.09□□□□□ -1.91
CLDN9O95484 PTGES3P5-201ENST00000455109 434 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 BTF3P5-201ENST00000457252 467 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN9O95484 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 SNORA48.10-201ENST00000516965 160 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 DUXAP2-201ENST00000519198 589 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
CLDN9O95484 NCAPGP2-201ENST00000557911 754 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLDN9O95484 MIR2682-201ENST00000580305 110 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 AC092954.1-201ENST00000609121 445 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 uc_338.25-201ENST00000613756 156 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC009464.1-201ENST00000615731 469 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.09□□□□□ -1.91
CLDN9O95484 ZNF663P-202ENST00000641770 1131 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 MTND5P24-201ENST00000438892 1767 ntBASIC3.09□□□□□ -1.91
CLDN9O95484 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN9O95484 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLDN9O95484 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.09□□□□□ -1.92
CLDN9O95484 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CLDN9O95484 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms