Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.49□□□□□ -1.53
VAMP4O75379 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.49□□□□□ -1.53
VAMP4O75379 ISCA1P6-201ENST00000427740 390 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 RPL22P17-201ENST00000438729 315 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.49□□□□□ -1.53
VAMP4O75379 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.49□□□□□ -1.53
VAMP4O75379 FABP3P2-201ENST00000453169 399 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 RPS23P7-201ENST00000466210 444 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC010618.1-201ENST00000469924 477 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AP000893.1-201ENST00000474462 794 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC007182.2-201ENST00000489251 402 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC090453.1-201ENST00000495560 436 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.49□□□□□ -1.53
VAMP4O75379 Y_RNA.672-201ENST00000516289 104 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 RNU6-347P-201ENST00000516658 105 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC008694.2-201ENST00000517591 306 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 MTND1P35-201ENST00000526739 508 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 GLYCAM1-201ENST00000546596 285 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC068446.3-201ENST00000555285 382 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AL512360.1-201ENST00000555346 234 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC124068.1-201ENST00000563131 678 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.49□□□□□ -1.53
VAMP4O75379 AC018552.3-201ENST00000567416 561 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.49□□□□□ -1.53
VAMP4O75379 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AC009033.1-201ENST00000624279 431 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.49□□□□□ -1.53
VAMP4O75379 OR52H1-202ENST00000641796 1061 ntBASIC5.49□□□□□ -1.53
VAMP4O75379 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VAMP4O75379 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.49□□□□□ -1.53
VAMP4O75379 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VAMP4O75379 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 AC114546.3-201ENST00000623582 1734 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VAMP4O75379 RNU1-85P-201ENST00000364127 164 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 SNORA62-201ENST00000365493 153 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 RNU6-146P-201ENST00000384602 108 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 MTND3P17-201ENST00000416968 344 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 HMGB3P20-201ENST00000417997 600 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 RPL21P111-201ENST00000418453 477 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.48□□□□□ -1.53
VAMP4O75379 RWDD4P2-201ENST00000426392 563 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 MTCO2P11-201ENST00000431069 680 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.48□□□□□ -1.53
VAMP4O75379 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.48□□□□□ -1.53
VAMP4O75379 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.48□□□□□ -1.53
VAMP4O75379 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.48□□□□□ -1.53
VAMP4O75379 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 OR5H5P-201ENST00000503164 928 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 RNA5SP360-201ENST00000516555 118 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 RNU6-201P-201ENST00000517100 61 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 AF235103.2-201ENST00000525753 346 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 ZNF705CP-201ENST00000530515 889 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 AC008127.2-201ENST00000549925 1075 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 AL845331.3-202ENST00000562856 261 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 MIR3939-201ENST00000582614 106 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 AC091905.1-201ENST00000624400 311 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.48□□□□□ -1.53
VAMP4O75379 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VAMP4O75379 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VAMP4O75379 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 XPOTP1-201ENST00000443317 2398 ntBASIC5.48□□□□□ -1.53
VAMP4O75379 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
VAMP4O75379 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VAMP4O75379 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.48□□□□□ -1.53
VAMP4O75379 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
VAMP4O75379 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
VAMP4O75379 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
VAMP4O75379 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.47□□□□□ -1.53
VAMP4O75379 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.47□□□□□ -1.53
VAMP4O75379 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.47□□□□□ -1.53
VAMP4O75379 RNU1-15P-201ENST00000353977 144 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VAMP4O75379 RNA5SP28-201ENST00000363841 119 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 RNU6-877P-201ENST00000383868 107 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 RNU6-483P-201ENST00000384088 108 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 SNORA51.6-201ENST00000384151 125 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 Y_RNA.481-201ENST00000384373 102 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 DHFRP6-201ENST00000401776 268 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 RNU2-8P-201ENST00000410727 190 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 RNU6-195P-201ENST00000411352 109 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 ZNF90P2-204ENST00000419323 1075 ntBASIC5.47□□□□□ -1.53
VAMP4O75379 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.47□□□□□ -1.53
VAMP4O75379 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.47□□□□□ -1.53
VAMP4O75379 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.47□□□□□ -1.53
VAMP4O75379 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms