Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SNX3O60493 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 ELOCP32-201ENST00000548625 324 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.49□□□□□ -1.85
SNX3O60493 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 AC053481.3-201ENST00000577881 843 ntBASIC3.49□□□□□ -1.85
SNX3O60493 KPNA2P3-201ENST00000584190 848 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC020914.6-201ENST00000594327 272 ntBASIC3.49□□□□□ -1.85
SNX3O60493 VN1R90P-201ENST00000595717 726 ntBASIC3.49□□□□□ -1.85
SNX3O60493 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 AC015726.1-201ENST00000602353 681 ntBASIC3.49□□□□□ -1.85
SNX3O60493 XIAPP1-201ENST00000603162 600 ntBASIC3.49□□□□□ -1.85
SNX3O60493 ELOCP35-201ENST00000604289 336 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL049634.3-201ENST00000604968 457 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL390208.1-201ENST00000605885 644 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC131159.1-201ENST00000621854 213 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC120349.3-201ENST00000624377 529 ntBASIC3.49□□□□□ -1.85
SNX3O60493 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 AL356473.1-201ENST00000406203 1408 ntBASIC3.49□□□□□ -1.85
SNX3O60493 OTUD4P1-201ENST00000237841 3067 ntBASIC3.49□□□□□ -1.85
SNX3O60493 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX3O60493 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 AC012618.3-205ENST00000637896 1496 ntBASIC3.48□□□□□ -1.85
SNX3O60493 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.48□□□□□ -1.85
SNX3O60493 RNA5SP505-201ENST00000364748 108 ntBASIC3.48□□□□□ -1.85
SNX3O60493 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 RNU6-398P-201ENST00000384143 109 ntBASIC3.48□□□□□ -1.85
SNX3O60493 RNU6-712P-201ENST00000410558 100 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC245052.5-201ENST00000416320 649 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC098592.1-201ENST00000419352 333 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 RPL7P34-201ENST00000433316 712 ntBASIC3.48□□□□□ -1.85
SNX3O60493 MTCYBP45-201ENST00000435243 565 ntBASIC3.48□□□□□ -1.85
SNX3O60493 MTND5P14-201ENST00000441481 1267 ntBASIC3.48□□□□□ -1.85
SNX3O60493 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 MTCYBP3-201ENST00000445588 1137 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC098826.2-201ENST00000452011 651 ntBASIC3.48□□□□□ -1.85
SNX3O60493 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
SNX3O60493 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC104685.1-201ENST00000502445 371 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 MTCYBP43-201ENST00000513621 740 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.48□□□□□ -1.85
SNX3O60493 RNU6-1129P-201ENST00000515964 104 ntBASIC3.48□□□□□ -1.85
SNX3O60493 SCARNA14-201ENST00000516903 136 ntBASIC3.48□□□□□ -1.85
SNX3O60493 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.48□□□□□ -1.85
SNX3O60493 MTATP6P15-201ENST00000527233 835 ntBASIC3.48□□□□□ -1.85
SNX3O60493 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 UBTFL10-201ENST00000528532 562 ntBASIC3.48□□□□□ -1.85
SNX3O60493 MTCYBP41-201ENST00000528913 1123 ntBASIC3.48□□□□□ -1.85
SNX3O60493 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.48□□□□□ -1.85
SNX3O60493 AC126177.3-201ENST00000551839 688 ntBASIC3.48□□□□□ -1.85
SNX3O60493 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.48□□□□□ -1.85
SNX3O60493 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.48□□□□□ -1.85
SNX3O60493 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.48□□□□□ -1.85
SNX3O60493 MTND3P12-201ENST00000559068 328 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 MIR5186-201ENST00000577504 120 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 AC012669.1-201ENST00000603209 283 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC107294.3-201ENST00000609211 526 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 AC091304.6-201ENST00000619761 202 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AL445264.1-201ENST00000621719 171 ntBASIC3.48□□□□□ -1.85
SNX3O60493 AC073476.4-201ENST00000628409 72 ntBASIC3.48□□□□□ -1.85
SNX3O60493 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SNX3O60493 AC244517.1-201ENST00000606030 2086 ntBASIC3.48□□□□□ -1.85
SNX3O60493 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.48□□□□□ -1.85
SNX3O60493 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SNX3O60493 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SNX3O60493 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.47□□□□□ -1.85
SNX3O60493 U3.11-201ENST00000364476 212 ntBASIC3.47□□□□□ -1.85
SNX3O60493 RNA5SP167-201ENST00000365461 116 ntBASIC3.47□□□□□ -1.85
SNX3O60493 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.47□□□□□ -1.85
SNX3O60493 MIR192-201ENST00000384915 110 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AL590084.2-201ENST00000401481 382 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AL138880.1-201ENST00000405824 642 ntBASIC3.47□□□□□ -1.85
SNX3O60493 VPS26BP1-201ENST00000417155 755 ntBASIC3.47□□□□□ -1.85
SNX3O60493 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.47□□□□□ -1.85
SNX3O60493 MTCO2P5-201ENST00000422621 426 ntBASIC3.47□□□□□ -1.85
SNX3O60493 AL593851.1-201ENST00000426171 157 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms