Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 MAPK10-253ENST00000641010 4072 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 MTND4P29-201ENST00000503122 1372 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 ZNF33CP-201ENST00000432492 2030 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 MIR16-1-201ENST00000385271 89 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC007066.1-201ENST00000392902 381 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 RPL32P23-201ENST00000397237 405 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC025750.1-201ENST00000399891 379 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 MIR1183-201ENST00000408856 89 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 VDAC1P6-201ENST00000430062 855 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC105402.2-201ENST00000438503 358 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 VN1R10P-201ENST00000447106 875 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.06□□□□□ -1.76
SMAD6O43541 MTND2P24-201ENST00000453434 806 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.06□□□□□ -1.76
SMAD6O43541 ARPC3P2-201ENST00000457786 533 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC068305.1-201ENST00000497406 726 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC025554.1-201ENST00000505641 188 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC116347.2-201ENST00000514912 523 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 RNA5SP179-201ENST00000517284 121 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.06□□□□□ -1.76
SMAD6O43541 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 DEFB108A-201ENST00000530110 222 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AP004247.1-201ENST00000531556 1289 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AP002812.4-201ENST00000532139 286 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.06□□□□□ -1.76
SMAD6O43541 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC091167.4-201ENST00000605079 184 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 TUG1_1.1-201ENST00000610654 145 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 CDRT1-208ENST00000630868 794 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 AC106871.1-201ENST00000568324 3102 ntBASIC4.06□□□□□ -1.76
SMAD6O43541 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SMAD6O43541 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SMAD6O43541 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMAD6O43541 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.06□□□□□ -1.76
SMAD6O43541 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.06□□□□□ -1.76
SMAD6O43541 MTCO1P23-201ENST00000415223 1526 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC016588.2-201ENST00000632484 3021 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 MIR217-201ENST00000384817 110 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 MIR153-1-201ENST00000384914 90 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 SNORD115-47-201ENST00000391226 86 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 RPL17P50-201ENST00000396131 546 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC068533.2-201ENST00000411872 306 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC004987.3-201ENST00000413879 771 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC092647.1-201ENST00000420654 287 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 Z93242.1-201ENST00000427102 353 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC008065.1-201ENST00000428525 348 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 MTND3P23-201ENST00000431980 347 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMAD6O43541 PAXBP1P1-201ENST00000449315 447 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.05□□□□□ -1.76
SMAD6O43541 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC104687.1-201ENST00000485829 412 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AL358832.1-201ENST00000497800 389 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC074344.1-201ENST00000512823 224 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.05□□□□□ -1.76
SMAD6O43541 AC008802.1-201ENST00000519121 791 ntBASIC4.05□□□□□ -1.76
SMAD6O43541 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.05□□□□□ -1.76
SMAD6O43541 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms