Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 OR6K3-202ENST00000368146 996 ntBASIC3.07□□□□□ -1.92
LSM1O15116 OR1L1-202ENST00000373686 1083 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC234772.1-201ENST00000377927 937 ntBASIC3.07□□□□□ -1.92
LSM1O15116 MTND4P13-201ENST00000402078 1023 ntBASIC3.07□□□□□ -1.92
LSM1O15116 MTCO2P31-201ENST00000402702 684 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AL133384.1-201ENST00000412744 351 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM1O15116 AC246680.2-201ENST00000422106 389 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AL121882.1-201ENST00000422893 417 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.07□□□□□ -1.92
LSM1O15116 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM1O15116 AC079780.1-201ENST00000428259 207 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC091286.1-201ENST00000431233 461 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC005345.1-201ENST00000431868 217 ntBASIC3.07□□□□□ -1.92
LSM1O15116 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
LSM1O15116 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
LSM1O15116 HMGB3P6-201ENST00000444896 598 ntBASIC3.07□□□□□ -1.92
LSM1O15116 RN7SL542P-201ENST00000467147 294 ntBASIC3.07□□□□□ -1.92
LSM1O15116 GAPDHP39-201ENST00000481866 979 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM1O15116 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM1O15116 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM1O15116 HIGD1AP1-201ENST00000550979 275 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC126177.3-201ENST00000551839 688 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM1O15116 AC090666.1-201ENST00000578241 445 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC006130.2-201ENST00000586202 326 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC012669.1-201ENST00000603209 283 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AP002906.1-201ENST00000603405 233 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC124312.4-201ENST00000605533 310 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC107871.2-201ENST00000612894 502 ntBASIC3.07□□□□□ -1.92
LSM1O15116 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AC009464.1-201ENST00000615731 469 ntBASIC3.07□□□□□ -1.92
LSM1O15116 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM1O15116 AC040168.1-201ENST00000623594 991 ntBASIC3.07□□□□□ -1.92
LSM1O15116 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 MFSD8-245ENST00000641743 948 ntBASIC3.07□□□□□ -1.92
LSM1O15116 AL163152.1-201ENST00000642001 374 ntBASIC3.07□□□□□ -1.92
LSM1O15116 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LSM1O15116 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM1O15116 AL049781.1-201ENST00000623195 3585 ntBASIC3.06□□□□□ -1.92
LSM1O15116 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LSM1O15116 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LSM1O15116 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM1O15116 CD24P4-201ENST00000382840 243 ntBASIC3.06□□□□□ -1.92
LSM1O15116 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
LSM1O15116 MIR490-201ENST00000384865 128 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AL023807.1-201ENST00000407932 359 ntBASIC3.06□□□□□ -1.92
LSM1O15116 U3.42-201ENST00000408746 214 ntBASIC3.06□□□□□ -1.92
LSM1O15116 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM1O15116 FCF1P2-201ENST00000415284 583 ntBASIC3.06□□□□□ -1.92
LSM1O15116 BX664727.1-201ENST00000416024 466 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM1O15116 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM1O15116 RPS6P14-201ENST00000425165 719 ntBASIC3.06□□□□□ -1.92
LSM1O15116 MTATP6P4-201ENST00000427725 675 ntBASIC3.06□□□□□ -1.92
LSM1O15116 SAR1AP4-201ENST00000429225 591 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 MTND4P15-201ENST00000437913 1033 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 AL645638.1-201ENST00000440519 361 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM1O15116 OR51B8P-201ENST00000449892 769 ntBASIC3.06□□□□□ -1.92
LSM1O15116 snoU109.4-201ENST00000458953 143 ntBASIC3.06□□□□□ -1.92
LSM1O15116 NUP58P1-201ENST00000502546 1738 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC118282.2-201ENST00000508739 374 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC048346.1-201ENST00000510247 144 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.06□□□□□ -1.92
LSM1O15116 RNA5SP135-201ENST00000517019 125 ntBASIC3.06□□□□□ -1.92
LSM1O15116 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM1O15116 HSPE1P20-201ENST00000538133 289 ntBASIC3.06□□□□□ -1.92
LSM1O15116 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM1O15116 EEF1B2P4-201ENST00000551398 348 ntBASIC3.06□□□□□ -1.92
LSM1O15116 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM1O15116 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.06□□□□□ -1.92
LSM1O15116 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 RPL23AP88-201ENST00000605759 454 ntBASIC3.06□□□□□ -1.92
LSM1O15116 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM1O15116 AL355365.1-201ENST00000616480 294 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC015967.1-201ENST00000619893 476 ntBASIC3.06□□□□□ -1.92
LSM1O15116 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AL356863.1-201ENST00000623378 1080 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AC095031.1-201ENST00000623685 672 ntBASIC3.06□□□□□ -1.92
LSM1O15116 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM1O15116 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LSM1O15116 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM1O15116 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM1O15116 VTRNA1-1-201ENST00000363120 99 ntBASIC3.05□□□□□ -1.92
LSM1O15116 MIR200C-201ENST00000384980 68 ntBASIC3.05□□□□□ -1.92
LSM1O15116 CYCSP45-201ENST00000402289 315 ntBASIC3.05□□□□□ -1.92
LSM1O15116 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM1O15116 AC245052.5-201ENST00000416320 649 ntBASIC3.05□□□□□ -1.92
LSM1O15116 ATG3P1-201ENST00000419507 911 ntBASIC3.05□□□□□ -1.92
LSM1O15116 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms