Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 PCNAP1-202ENST00000595299 752 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC113194.1-201ENST00000606037 500 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC018926.3-201ENST00000618841 406 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC012314.7-201ENST00000619693 93 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC015967.1-201ENST00000619893 476 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC099506.2-201ENST00000623074 221 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 U6.105-201ENST00000637379 88 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 AL049781.1-201ENST00000623195 3585 ntBASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM49D1C9J1S8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MIR208A-201ENST00000362287 71 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MIR183-201ENST00000384958 110 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 SNORA40.2-201ENST00000390847 128 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC009237.2-201ENST00000421358 284 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 FGF7P5-201ENST00000441829 291 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AL358794.1-201ENST00000445689 381 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 RPL29P29-201ENST00000448725 423 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 NPM1P13-201ENST00000452663 865 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC005410.1-202ENST00000460347 485 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 RPL31P13-201ENST00000484151 370 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC104108.1-201ENST00000509930 412 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 RN7SKP265-201ENST00000516448 223 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC023632.1-201ENST00000518463 375 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AF279873.1-201ENST00000523393 313 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 NCAPGP2-201ENST00000557911 754 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MIR5708-201ENST00000579723 85 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 BNIP3P22-201ENST00000593399 556 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC002487.1-201ENST00000604565 994 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC063944.3-201ENST00000609969 533 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC010975.3-201ENST00000618727 978 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AP002791.1-201ENST00000623291 381 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AC018692.3-201ENST00000623929 123 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 AP001002.2-201ENST00000625137 386 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 MAPK10-362ENST00000641864 4484 ntBASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM49D1C9J1S8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC093010.3-201ENST00000570269 15214 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL356320.2-201ENST00000417263 507 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 RPS3AP37-201ENST00000419176 745 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC006946.1-201ENST00000429106 328 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 MTND2P5-201ENST00000432656 1006 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC004865.1-201ENST00000442276 1003 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 MTCYBP42-201ENST00000444653 1130 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 GAPDHP27-201ENST00000447427 1020 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 PRDX3P3-201ENST00000447765 522 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC004022.1-201ENST00000447766 1066 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC112492.1-201ENST00000449607 712 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 CYCSP35-201ENST00000451978 304 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 snoU13.22-201ENST00000459428 104 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC109925.1-201ENST00000478069 331 ntBASIC3□□□□□ -1.93
TRIM49D1C9J1S8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3□□□□□ -1.93
TRIM49D1C9J1S8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms