Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubd1Q9R1K7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Tubd1Q9R1K7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubd1Q9R1K7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubd1Q9R1K7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tubd1Q9R1K7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tubd1Q9R1K7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Mir6404-201ENSMUST00000183699 94 ntBASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tubd1Q9R1K7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tubd1Q9R1K7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tubd1Q9R1K7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tubd1Q9R1K7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tubd1Q9R1K7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubd1Q9R1K7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Tubd1Q9R1K7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Tubd1Q9R1K7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubd1Q9R1K7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tubd1Q9R1K7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms