Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hmgn3Q9DCB1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.43■□□□□ 0.06
Hmgn3Q9DCB1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Gm44549-201ENSMUST00000208351 577 ntBASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hmgn3Q9DCB1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hmgn3Q9DCB1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Gm27405-201ENSMUST00000184201 112 ntBASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hmgn3Q9DCB1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.39■□□□□ 0.06
Hmgn3Q9DCB1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Gm11927-201ENSMUST00000118472 759 ntBASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hmgn3Q9DCB1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms