Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Gm44544-201ENSMUST00000207052 1844 ntBASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Gm43294-201ENSMUST00000202850 2490 ntBASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Mrpl55Q9CZ83 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Gm5417-201ENSMUST00000079706 384 ntBASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Gm45906-201ENSMUST00000208911 1430 ntBASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Mrpl55Q9CZ83 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Gm7856-201ENSMUST00000117514 1493 ntBASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Mir5122-201ENSMUST00000175004 89 ntBASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Mrpl55Q9CZ83 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.8□□□□□ -0.68
Mrpl55Q9CZ83 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms