Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gm11249-201ENSMUST00000117071 859 ntBASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gm12896-201ENSMUST00000118430 226 ntBASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hdhd3Q9CYW4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gm24841-201ENSMUST00000158676 357 ntBASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gm10517-202ENSMUST00000192970 758 ntBASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hdhd3Q9CYW4 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hdhd3Q9CYW4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms