Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Gm37025-201ENSMUST00000195159 829 ntBASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1lQ9CXF7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1lQ9CXF7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Gm13158-201ENSMUST00000122007 736 ntBASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1lQ9CXF7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1lQ9CXF7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Chd1lQ9CXF7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms