Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retreg3Q9CQV4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Gm29518-201ENSMUST00000190858 372 ntBASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 AC153961.1-201ENSMUST00000217760 385 ntBASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retreg3Q9CQV4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Gm6623-201ENSMUST00000173570 544 ntBASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Gm17971-201ENSMUST00000190239 806 ntBASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retreg3Q9CQV4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg3Q9CQV4 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.46■□□□□ 0.22
Retreg3Q9CQV4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg3Q9CQV4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg3Q9CQV4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retreg3Q9CQV4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Gm17808-201ENSMUST00000200859 894 ntBASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Retreg3Q9CQV4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retreg3Q9CQV4 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms