Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Gm13183-201ENSMUST00000118615 789 ntBASIC8.78□□□□□ -1
Sec61bQ9CQS8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 AC153794.1-201ENSMUST00000169148 126 ntBASIC8.78□□□□□ -1
Sec61bQ9CQS8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.78□□□□□ -1
Sec61bQ9CQS8 AC107711.5-202ENSMUST00000226429 702 ntBASIC8.78□□□□□ -1
Sec61bQ9CQS8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC8.78□□□□□ -1
Sec61bQ9CQS8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Sec61bQ9CQS8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Sec61bQ9CQS8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Gm1818-201ENSMUST00000169406 1184 ntBASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Gm44454-201ENSMUST00000198541 138 ntBASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Sec61bQ9CQS8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC8.76□□□□□ -1.01
Sec61bQ9CQS8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms