Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mrpl54Q9CPW3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mrpl54Q9CPW3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mrpl54Q9CPW3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mrpl54Q9CPW3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mrpl54Q9CPW3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Mrpl54Q9CPW3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Gm44549-201ENSMUST00000208351 577 ntBASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mrpl54Q9CPW3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Gm13241-201ENSMUST00000094493 780 ntBASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mrpl54Q9CPW3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Mrpl54Q9CPW3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Mrpl54Q9CPW3 Phf7-203ENSMUST00000226565 1971 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms