Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh15Q99PJ1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh15Q99PJ1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh15Q99PJ1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh15Q99PJ1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Gm11424-201ENSMUST00000121929 829 ntBASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Gm7787-201ENSMUST00000216858 688 ntBASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdh15Q99PJ1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Gm15358-201ENSMUST00000119249 520 ntBASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh15Q99PJ1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms