Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim3Q99PE5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smim3Q99PE5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.03□□□□□ -0.16
Smim3Q99PE5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Flg-201ENSMUST00000050758 1488 ntBASIC14.03□□□□□ -0.16
Smim3Q99PE5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.03□□□□□ -0.16
Smim3Q99PE5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.03□□□□□ -0.16
Smim3Q99PE5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim3Q99PE5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smim3Q99PE5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Gm7291-201ENSMUST00000199147 382 ntBASIC14.02□□□□□ -0.17
Smim3Q99PE5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim3Q99PE5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.01□□□□□ -0.17
Smim3Q99PE5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.01□□□□□ -0.17
Smim3Q99PE5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.01□□□□□ -0.17
Smim3Q99PE5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smim3Q99PE5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim3Q99PE5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smim3Q99PE5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim3Q99PE5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smim3Q99PE5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smim3Q99PE5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim3Q99PE5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms