Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.32□□□□□ -0.12
Scrt1Q99M85 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Rps4l-201ENSMUST00000071745 943 ntBASIC14.32□□□□□ -0.12
Scrt1Q99M85 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scrt1Q99M85 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.32□□□□□ -0.12
Scrt1Q99M85 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Gm15372-201ENSMUST00000120729 834 ntBASIC14.31□□□□□ -0.12
Scrt1Q99M85 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.31□□□□□ -0.12
Scrt1Q99M85 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.31□□□□□ -0.12
Scrt1Q99M85 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scrt1Q99M85 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Gm7862-201ENSMUST00000121461 292 ntBASIC14.3□□□□□ -0.12
Scrt1Q99M85 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Gm8000-201ENSMUST00000188378 592 ntBASIC14.3□□□□□ -0.12
Scrt1Q99M85 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scrt1Q99M85 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Scrt1Q99M85 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Gm27867-201ENSMUST00000184778 125 ntBASIC14.29□□□□□ -0.12
Scrt1Q99M85 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scrt1Q99M85 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms