Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.24■□□□□ 0.35
Clp1Q99LI9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clp1Q99LI9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.23■□□□□ 0.35
Clp1Q99LI9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.23■□□□□ 0.35
Clp1Q99LI9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Clp1Q99LI9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clp1Q99LI9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Gm11764-201ENSMUST00000120221 623 ntBASIC17.22■□□□□ 0.35
Clp1Q99LI9 Mir8117-201ENSMUST00000184773 107 ntBASIC17.22■□□□□ 0.35
Clp1Q99LI9 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.22■□□□□ 0.35
Clp1Q99LI9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.22■□□□□ 0.35
Clp1Q99LI9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clp1Q99LI9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clp1Q99LI9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clp1Q99LI9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Clp1Q99LI9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Mir3113-201ENSMUST00000175478 76 ntBASIC17.2■□□□□ 0.34
Clp1Q99LI9 Mir6404-201ENSMUST00000183699 94 ntBASIC17.2■□□□□ 0.34
Clp1Q99LI9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clp1Q99LI9 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms