Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.84■□□□□ 0.13
Pcdhb20Q91XZ9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb20Q91XZ9 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.83■□□□□ 0.13
Pcdhb20Q91XZ9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb20Q91XZ9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb20Q91XZ9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gm17807-201ENSMUST00000186869 298 ntBASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gm37629-201ENSMUST00000193635 1050 ntBASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb20Q91XZ9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm9103-201ENSMUST00000119371 405 ntBASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm25318-201ENSMUST00000122554 314 ntBASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm29747-201ENSMUST00000194764 585 ntBASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb20Q91XZ9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Gm37965-201ENSMUST00000195304 1362 ntBASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb20Q91XZ9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms