Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Gm6345-202ENSMUST00000180900 204 ntBASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga4Q91XY4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Gm33142-201ENSMUST00000193913 867 ntBASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga4Q91XY4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga4Q91XY4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhga4Q91XY4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms