Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Gm6296-201ENSMUST00000222599 943 ntBASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhgb5Q91XX5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhgb5Q91XX5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Gm25745-201ENSMUST00000174945 133 ntBASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhgb5Q91XX5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhgb5Q91XX5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 AW822252-206ENSMUST00000208904 237 ntBASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhgb5Q91XX5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Gm10060-201ENSMUST00000212002 111 ntBASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhgb5Q91XX5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms