Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tram1Q91V04 Gm37025-201ENSMUST00000195159 829 ntBASIC14.14□□□□□ -0.15
Tram1Q91V04 Gm42642-201ENSMUST00000200683 355 ntBASIC14.14□□□□□ -0.15
Tram1Q91V04 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Tram1Q91V04 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tram1Q91V04 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Gm4968-201ENSMUST00000071458 858 ntBASIC14.13□□□□□ -0.15
Tram1Q91V04 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tram1Q91V04 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tram1Q91V04 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.12□□□□□ -0.15
Tram1Q91V04 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tram1Q91V04 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Asic1-205ENSMUST00000228185 1818 ntBASIC14.11□□□□□ -0.15
Tram1Q91V04 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Gm24841-201ENSMUST00000158676 357 ntBASIC14.11□□□□□ -0.15
Tram1Q91V04 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.11□□□□□ -0.15
Tram1Q91V04 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.11□□□□□ -0.15
Tram1Q91V04 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tram1Q91V04 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tram1Q91V04 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Tram1Q91V04 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tram1Q91V04 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tram1Q91V04 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tram1Q91V04 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms