Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Gm21362-201ENSMUST00000194272 928 ntBASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Snrnp25Q8VIK1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snrnp25Q8VIK1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.14■□□□□ 0.34
Snrnp25Q8VIK1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Snrnp25Q8VIK1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Snrnp25Q8VIK1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Snrnp25Q8VIK1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snrnp25Q8VIK1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Snrnp25Q8VIK1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms