Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TraipQ8VIG6 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.38■□□□□ 0.37
TraipQ8VIG6 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.37■□□□□ 0.37
TraipQ8VIG6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TraipQ8VIG6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.36■□□□□ 0.37
TraipQ8VIG6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TraipQ8VIG6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm6443-201ENSMUST00000203599 874 ntBASIC17.35■□□□□ 0.37
TraipQ8VIG6 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.35■□□□□ 0.37
TraipQ8VIG6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.35■□□□□ 0.37
TraipQ8VIG6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TraipQ8VIG6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Gm43514-201ENSMUST00000198852 424 ntBASIC17.34■□□□□ 0.37
TraipQ8VIG6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.34■□□□□ 0.37
TraipQ8VIG6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TraipQ8VIG6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.33■□□□□ 0.37
TraipQ8VIG6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TraipQ8VIG6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.33■□□□□ 0.36
TraipQ8VIG6 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.33■□□□□ 0.36
TraipQ8VIG6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TraipQ8VIG6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.32■□□□□ 0.36
TraipQ8VIG6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TraipQ8VIG6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.32■□□□□ 0.36
TraipQ8VIG6 Gm4535-201ENSMUST00000182274 558 ntBASIC17.32■□□□□ 0.36
TraipQ8VIG6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TraipQ8VIG6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms