Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ddx39aQ8VDW0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx39aQ8VDW0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ddx39aQ8VDW0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ddx39aQ8VDW0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ddx39aQ8VDW0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ddx39aQ8VDW0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx39aQ8VDW0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx39aQ8VDW0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx39aQ8VDW0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx39aQ8VDW0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx39aQ8VDW0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms