Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rprd1aQ8VDS4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rprd1aQ8VDS4 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Gm10819-201ENSMUST00000099988 561 ntBASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.82■□□□□ 0.28
Rprd1aQ8VDS4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Gm15794-201ENSMUST00000120182 631 ntBASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rprd1aQ8VDS4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Gm10052-201ENSMUST00000168019 960 ntBASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Ank2-226ENSMUST00000189368 339 ntBASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Gm7729-201ENSMUST00000050143 801 ntBASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rprd1aQ8VDS4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms