Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nup58Q8R332 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.56■□□□□ 0.4
Nup58Q8R332 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nup58Q8R332 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.56■□□□□ 0.4
Nup58Q8R332 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.55■□□□□ 0.4
Nup58Q8R332 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Gm13559-201ENSMUST00000120476 863 ntBASIC17.55■□□□□ 0.4
Nup58Q8R332 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.55■□□□□ 0.4
Nup58Q8R332 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.55■□□□□ 0.4
Nup58Q8R332 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nup58Q8R332 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nup58Q8R332 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nup58Q8R332 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.54■□□□□ 0.4
Nup58Q8R332 Gm11539-201ENSMUST00000119837 557 ntBASIC17.54■□□□□ 0.4
Nup58Q8R332 Gm13436-201ENSMUST00000120418 567 ntBASIC17.54■□□□□ 0.4
Nup58Q8R332 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.54■□□□□ 0.4
Nup58Q8R332 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nup58Q8R332 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nup58Q8R332 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.53■□□□□ 0.4
Nup58Q8R332 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nup58Q8R332 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.53■□□□□ 0.4
Nup58Q8R332 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nup58Q8R332 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.52■□□□□ 0.4
Nup58Q8R332 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nup58Q8R332 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Nup58Q8R332 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup58Q8R332 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup58Q8R332 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nup58Q8R332 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nup58Q8R332 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nup58Q8R332 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Nup58Q8R332 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms